RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NKX3-1Q99801 234 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-206ENST00000487062 NUDT16L1Q9BRJ7 211 aaKnown RBP6.09□□□□□ -1.43
SF3A3-206ENST00000487062 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-206ENST00000487062 CLEC4MQ9H2X3 399 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-206ENST00000487062 KCNK15Q9H427 330 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 SCPEP1Q9HB40 452 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 TUBG2Q9NRH3 451 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 PCDHB16Q9NRJ7 776 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 RBFOX1Q9NWB1 397 aaKnown RBP6.09□□□□□ -1.43
SF3A3-206ENST00000487062 TAS2R8Q9NYW2 309 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 ING4Q9UNL4 249 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 RHBDD3Q9Y3P4 386 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 CACNG2Q9Y698 323 aa6.09□□□□□ -1.43
SF3A3-206ENST00000487062 MYO7BQ6PIF6 2116 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 FRYQ5TBA9 3013 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 FAM230AA0A1W2PPH8 454 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 A0A1W2PR80 420 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 OR5H1A6NKK0 313 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ANKRD30BLA7E2S9 258 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 CD300LBA8K4G0 201 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF850A8MQ14 1090 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ORC5O43913 435 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF780AO75290 641 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 CRTAPO75718 401 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 KDM4BO94953 1096 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 MPIG6BO95866 241 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 CST4P01036 141 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 NGFP01138 241 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 IGKV3-15P01624 115 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 CSTBP04080 98 aaKnown RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM225BP0DP42 221 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 NAT2P11245 290 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 SELEP16581 610 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 PSMB1P20618 241 aaKnown RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 FAUP35544 74 aaKnown RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 GDNFP39905 211 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 WNT5AP41221 380 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 RAD52P43351 418 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 OR3A4PP47883 348 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 BCAP31P51572 246 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ACTBP60709 375 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 PPP1CBP62140 327 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ACTG1P63261 375 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 QRFPP83859 136 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 PLA2G7Q13093 441 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 TNK1Q13470 666 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ARL6IP1Q15041 203 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 TSC22D1Q15714 1073 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 C3orf36Q3SXR2 165 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 SLC22A6Q4U2R8 563 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 TIMM23BQ5SRD1 257 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 OR10K2Q6IF99 312 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 PLET1Q6UQ28 207 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 FBXW12Q6X9E4 464 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 C3P1Q6ZMU1 363 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 MRGPRGQ86SM5 289 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ZDHHC23Q8IYP9 409 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 RPRMLQ8N4K4 120 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 WDR31Q8NA23 367 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 NAXEQ8NCW5 288 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 OR56B1Q8NGI3 324 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 OR52I2Q8NH67 350 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 UBASH3BQ8TF42 649 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 MUCL1Q96DR8 90 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 PAPOLGQ9BWT3 736 aaKnown RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 TMEM59Q9BXS4 323 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 METTL9Q9H1A3 318 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 DPAGT1Q9H3H5 408 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 AUNIPQ9H7T9 357 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ELL3Q9HB65 397 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 MYEF2Q9P2K5 600 aaKnown RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 ZNF629Q9UEG4 869 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 NOP16Q9Y3C1 178 aaKnown RBP6.08□□□□□ -1.44
SF3A3-206ENST00000487062 MPC1Q9Y5U8 109 aa6.08□□□□□ -1.44
SF3A3-206ENST00000487062 SVILO95425 2214 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 FUOMA2VDF0 154 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 EEF1E1-BLOC1S5C9J1V9 151 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 H7C417 338 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 LANCL1O43813 399 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 CDC14BO60729 498 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 SMPD2O60906 423 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 AGFG2O95081 481 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 CYB5AP00167 134 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 LPLP06858 475 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 CELA3BP08861 270 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 CSF1P09603 554 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 RAC2P15153 192 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 SPNP16150 400 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 CPT2P23786 658 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 PLA2G5P39877 138 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 RFX2P48378 723 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 SRP9P49458 86 aaKnown RBP6.07□□□□□ -1.44
SF3A3-206ENST00000487062 VEGFCP49767 419 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 UCP2P55851 309 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 RPS27AP62979 156 aaKnown RBP6.07□□□□□ -1.44
SF3A3-206ENST00000487062 PRDX4Q13162 271 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 SNTB2Q13425 540 aaKnown RBP6.07□□□□□ -1.44
SF3A3-206ENST00000487062 UNC119Q13432 240 aa6.07□□□□□ -1.44
SF3A3-206ENST00000487062 HLXQ14774 488 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-206ENST00000487062 RSU1Q15404 277 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms