RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 SDHBP21912 280 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 KCNJ3P48549 501 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 GNB2P62879 340 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 OR10G3Q8NGC4 313 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 OR5B3Q8NH48 314 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 EXTL1Q92935 676 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 ERGIC1Q969X5 290 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 ALKBH3Q96Q83 286 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 BARX1Q9HBU1 254 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 SLC25A6P12236 298 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 ZNRF4Q8WWF5 429 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 COX14Q96I36 57 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 MFRPQ9BY79 579 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 A0A1B0GTH9 108 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 CLEC18AA5D8T8 446 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 OR5H15A6NDH6 313 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 OR5H1A6NKK0 313 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 FFAR1O14842 300 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 HYAL3O43820 417 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 HEXAP06865 529 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 GP1BAP07359 652 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 KISS1Q15726 138 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 GUK1Q16774 197 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 MIDNQ504T8 468 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 RPL7L1Q6DKI1 246 aaKnown RBP14.72□□□□□ -0.05
COL7A1-210ENST00000487017 VN1R4Q7Z5H5 301 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 CLEC18CQ8NCF0 446 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 CMBLQ96DG6 245 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 TIMD4Q96H15 378 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 CXorf58Q96LI9 332 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 TRIB1Q96RU8 372 aa14.72□□□□□ -0.05
COL7A1-210ENST00000487017 TO15178 435 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 GSTZ1O43708 216 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-210ENST00000487017 RAB35Q15286 201 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 NHLRC1Q6VVB1 395 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 CHEK1O14757 476 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 CTDSPLO15194 276 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 CT45A10P0DMU9 189 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 SMAD4Q13485 552 aaKnown RBP14.71□□□□□ -0.05
COL7A1-210ENST00000487017 OR2T2Q6IF00 324 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 FBXL14Q8N1E6 418 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 LOXL2Q9Y4K0 774 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 AKR1C3P42330 323 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 APOBEC3DQ96AK3 386 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-210ENST00000487017 NEU3Q9UQ49 428 aa14.71□□□□□ -0.05
COL7A1-210ENST00000487017 HMSDA8MTL9 139 aa14.71□□□□□ -0.06
COL7A1-210ENST00000487017 G3V3Q6 166 aa14.71□□□□□ -0.06
COL7A1-210ENST00000487017 GPM6AP51674 278 aa14.71□□□□□ -0.06
COL7A1-210ENST00000487017 PJVKQ0ZLH3 352 aa14.71□□□□□ -0.06
COL7A1-210ENST00000487017 UBE2ZQ9H832 354 aaPredicted RBP14.71□□□□□ -0.06
COL7A1-210ENST00000487017 FIGNL2A6NMB9 653 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 ABI3BPQ7Z7G0 1075 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 ADPRHL1Q8NDY3 354 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 S1PR3Q99500 378 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 VPS25Q9BRG1 176 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 NARFLQ9H6Q4 476 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 PROCRQ9UNN8 238 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 CST7O76096 145 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 FGF7P21781 194 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 DRAM2Q6UX65 266 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 TMEM18Q96B42 140 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 VN1R1Q9GZP7 353 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 ADH4P08319 380 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 SP6Q3SY56 376 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 PHYHIPLQ96FC7 376 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 CACFD1Q9UGQ2 172 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF230Q9UIE0 474 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-210ENST00000487017 ALG1L2C9J202 215 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 M0R1B8 84 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-210ENST00000487017 HOXC4P09017 264 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-210ENST00000487017 CLEC12BQ2HXU8 276 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 OR4D11Q8NGI4 311 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 NTNG2Q96CW9 530 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF251Q9BRH9 671 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 H3BP45 60 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 DHRS3O75911 302 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 MPC2O95563 127 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 IRF3Q14653 427 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 MIXL1Q9H2W2 232 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 GAR1Q9NY12 217 aaKnown RBP14.7□□□□□ -0.06
COL7A1-210ENST00000487017 TMED3Q9Y3Q3 217 aa14.7□□□□□ -0.06
COL7A1-210ENST00000487017 MBTPS2O43462 519 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 IGHA1P01876 353 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 CT62P0C5K7 136 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SULT1A3P0DMM9 295 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SULT1A4P0DMN0 295 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 PTGFRP43088 359 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 PMP22Q01453 160 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 Q7L0L9 218 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SSX7Q7RTT5 188 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 EDARADDQ8WWZ3 215 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF275Q9NSD4 429 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-210ENST00000487017 KIAA1456Q9P272 454 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 A0A1W2PPQ1 181 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 C2CD4DB7Z1M9 353 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 NPIPB8E9PQR5 432 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 CCL7P80098 99 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 TRILQ7L0X0 811 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms