RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 ZDHHC23Q8IYP9 409 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 OR4M2Q8NGB6 313 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 BORCS8Q96FH0 119 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 CMTM3Q96MX0 182 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 GAL3ST1Q99999 423 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 SRRQ9GZT4 340 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 KCNJ16Q9NPI9 418 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
COL9A1-207ENST00000486080 SPTBN1Q01082 2364 aaKnown RBP12.35□□□□□ -0.43
COL9A1-207ENST00000486080 ZG16O60844 167 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 BPNT1O95861 308 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 PLATP00750 562 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 VSIG8P0DPA2 414 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 TALDO1P37837 337 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 RBP2P50120 134 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 ZP1P60852 638 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 NKX6-1P78426 367 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 BSPH1Q075Z2 132 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 UNC119Q13432 240 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 ZNF718Q3SXZ3 478 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 PYDC2Q56P42 97 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 XKRXQ6PP77 449 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 TMEM108Q6UXF1 575 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 LHFPL2Q6ZUX7 228 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 FTMTQ8N4E7 242 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 PNLDC1Q8NA58 520 aaKnown RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 TNFAIP8L1Q8WVP5 186 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 ITFG2Q969R8 447 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 C14orf119Q9NWQ9 140 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 ICE1Q9Y2F5 2266 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 A0A1W2PP11 408 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 B8ZZF3 427 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 SPRY1O43609 319 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 NAT2P11245 290 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 GPM6AP51674 278 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 MBNL2Q5VZF2 373 aaKnown RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 MTFR2Q6P444 385 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 VHLLQ6RSH7 139 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 METAP1DQ6UB28 335 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 LRP11Q86VZ4 500 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 OR5P3Q8WZ94 311 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 ITPKCQ96DU7 683 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 S100A16Q96FQ6 103 aaKnown RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 TECTBQ96PL2 329 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 MRPL15Q9P015 296 aaKnown RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 PURGQ9UJV8 347 aaKnown RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 ING4Q9UNL4 249 aa12.34□□□□□ -0.43
COL9A1-207ENST00000486080 MRPS7Q9Y2R9 242 aaKnown RBP12.34□□□□□ -0.43
COL9A1-207ENST00000486080 PQLC2LA1A4F0 135 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ABCD4O14678 606 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ANGPTL7O43827 346 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 KDM4BO94953 1096 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM225BP0DP42 221 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 SELEP16581 610 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 TUBG1P23258 451 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 CDK2P24941 298 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 PTAFRP25105 342 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 GCH1P30793 250 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 PITPNBP48739 271 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ATP1B3P54709 279 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 TFF3Q07654 80 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 RGS7BPQ6MZT1 257 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-207ENST00000486080 CALHM1Q8IU99 346 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 OR10K1Q8NGX5 313 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 RAB40AQ8WXH6 277 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 NEK6Q9HC98 313 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 TUBG2Q9NRH3 451 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ABCB10Q9NRK6 738 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 SPEF1Q9Y4P9 236 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 MPC1Q9Y5U8 109 aa12.33□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF732B4DXR9 585 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 CTAG2O75638 210 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 C1QL1O75973 258 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 KITLGP21583 273 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 GLRXP35754 106 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 BAK1Q16611 211 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 SLC22A6Q4U2R8 563 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 SSX8Q7RTT4 187 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 C1orf174Q8IYL3 243 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM171Q8WVE6 324 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 RNF170Q96K19 258 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 HIST1H2AAQ96QV6 131 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 ATG5Q9H1Y0 275 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 BANF2Q9H503 90 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 ANKHD1Q8IWZ3 2542 aaKnown RBP12.32□□□□□ -0.44
COL9A1-207ENST00000486080 ROS1P08922 2347 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 TMEM14DPA8MWL7 114 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 H0YL77 283 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 TIMM8AO60220 97 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-207ENST00000486080 UPK1BO75841 260 aa12.32□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF250P15622 560 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms