RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TFPIP10646 304 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 NQO1P15559 274 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 LOXP28300 417 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 KIR2DL2P43627 348 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 DAP3P51398 398 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SSBP2P81877 361 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SLC36A2Q495M3 483 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ACSM3Q53FZ2 586 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 PAN3Q58A45 887 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TRIQKQ629K1 86 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SAXO2Q658L1 398 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ANKRD34AQ69YU3 496 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OGFOD2Q6N063 350 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF474Q6S9Z5 364 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 GDPD3Q7L5L3 318 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OR10G3Q8NGC4 313 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OR10V1Q8NGI7 309 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ZBTB8AQ96BR9 441 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SGTBQ96EQ0 304 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 KIRREL1Q96J84 757 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OR8D2Q9GZM6 311 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 NXF5Q9H1B4 397 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 MYOZ1Q9NP98 299 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 FASNP49327 2511 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 IMPA2O14732 288 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 MSTNO14793 375 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 RGS14O43566 566 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 KIAA0513O60268 411 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ICOSLGO75144 302 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SS18L1O75177 396 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 HSBP1O75506 76 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 IFNA21P01568 189 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 CD74P04233 296 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 IGFBP5P24593 272 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 FPR3P25089 353 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 GSSP48637 474 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 DIO3P55073 304 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 MAD2L1Q13257 205 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TOMM34Q15785 309 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 DDI2Q5TDH0 399 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 NOXRED1Q6NXP6 359 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 Q6ZSR9 355 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 Q71RC1 249 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TSEN54Q7Z6J9 526 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 LRRC18Q8N456 261 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 KLHDC1Q8N7A1 406 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF738Q8NE65 137 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OR1J4Q8NGS1 313 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 ZFP28Q8NHY6 868 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM163Q8TC26 289 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 MRGPRDQ8TDS7 321 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SNAPC3Q92966 411 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TESCQ96BS2 214 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 BPIFA2Q96DR5 249 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 CENPNQ96H22 339 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 RILPQ96NA2 401 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 NODALQ96S42 347 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM204Q9BSN7 226 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 CSTL1Q9H114 145 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM38AQ9H6F2 299 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 REEP4Q9H6H4 257 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 EML4Q9HC35 981 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 EXOSC3Q9NQT5 275 aaKnown RBP4.54□□□□□ -1.68
CCDC39-205ENST00000485055 SMPXQ9UHP9 88 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 PTPN13Q12923 2485 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1B0GV72 72 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 CENPXA8MT69 81 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 B5MCH6 92 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 CLDN34H7C241 214 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 J3QLI3 93 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 XPNPEP2O43895 674 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 VSIG10L2P0DP72 767 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF23P17027 643 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 NDUFB7P17568 137 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 DUSP1P28562 367 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 RFX3P48380 749 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF136P52737 540 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 MLLT11Q13015 90 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-205ENST00000485055 MYBPHQ13203 477 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF141Q15928 474 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF239Q16600 458 aaKnown RBP4.53□□□□□ -1.68
CCDC39-205ENST00000485055 FAM153CQ494X1 144 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ARMCX4Q5H9R4 360 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 C9orf135Q5VTT2 229 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF544Q6NX49 715 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 PAQR6Q6TCH4 344 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 CASP12Q6UXS9 341 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 LINGO2Q7L985 606 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 LHFPL3Q86UP9 236 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 CMTM1Q8IZ96 169 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 OR9A2Q8NGT5 310 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 OR5P2Q8WZ92 322 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 ABTB1Q969K4 478 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-205ENST00000485055 FLYWCH2Q96CP2 140 aaKnown RBP4.53□□□□□ -1.68
CCDC39-205ENST00000485055 PPP3R2Q96LZ3 170 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 C12orf57Q99622 126 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 HCAR1Q9BXC0 346 aa4.53□□□□□ -1.68
CCDC39-205ENST00000485055 CDCA4Q9BXL8 241 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms