RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 KCNK2O95069 426 aa2□□□□□ -2.09
CALD1-219ENST00000480638 OR5AC1P0C628 307 aa2□□□□□ -2.09
CALD1-219ENST00000480638 UBCP0CG48 685 aaKnown RBP2□□□□□ -2.09
CALD1-219ENST00000480638 GSTM3P21266 225 aa2□□□□□ -2.09
CALD1-219ENST00000480638 PSMD8P48556 350 aa2□□□□□ -2.09
CALD1-219ENST00000480638 ZNF470Q6ECI4 717 aa2□□□□□ -2.09
CALD1-219ENST00000480638 FA2HQ7L5A8 372 aa2□□□□□ -2.09
CALD1-219ENST00000480638 PDPNQ86YL7 162 aa2□□□□□ -2.09
CALD1-219ENST00000480638 LRRC8AQ8IWT6 810 aa2□□□□□ -2.09
CALD1-219ENST00000480638 SLC30A8Q8IWU4 369 aa2□□□□□ -2.09
CALD1-219ENST00000480638 RNF10Q8N5U6 811 aaKnown RBP2□□□□□ -2.09
CALD1-219ENST00000480638 CCDC148Q8NFR7 591 aa2□□□□□ -2.09
CALD1-219ENST00000480638 ITFG1Q8TB96 612 aa2□□□□□ -2.09
CALD1-219ENST00000480638 RCN3Q96D15 328 aa2□□□□□ -2.09
CALD1-219ENST00000480638 SMARCD1Q96GM5 515 aa2□□□□□ -2.09
CALD1-219ENST00000480638 FANCEQ9HB96 536 aa2□□□□□ -2.09
CALD1-219ENST00000480638 SND1-IT1Q9HBX3 110 aa2□□□□□ -2.09
CALD1-219ENST00000480638 FBXO8Q9NRD0 319 aa2□□□□□ -2.09
CALD1-219ENST00000480638 INIPQ9NRY2 104 aa2□□□□□ -2.09
CALD1-219ENST00000480638 D6RAR5 112 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 E7EQL1 145 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 LINC01619G3V211 115 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 C15orf65H3BRN8 121 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 BEX3Q00994 111 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 ZNF141Q15928 474 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 KLHL40Q2TBA0 621 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 BEX5Q5H9J7 111 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 LIN9Q5TKA1 542 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 WDR31Q8NA23 367 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 ZFP62Q8NB50 900 aaPredicted RBP1.99□□□□□ -2.09
CALD1-219ENST00000480638 OR4D6Q8NGJ1 314 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 OR1S1Q8NH92 325 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 YIPF5Q969M3 257 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 STACQ99469 402 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 VSIRQ9H7M9 311 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 CES1P1Q9UKY3 287 aa1.99□□□□□ -2.09
CALD1-219ENST00000480638 NDRG2Q9UN36 371 aaKnown RBP1.99□□□□□ -2.09
CALD1-219ENST00000480638 A0A1W2PRD5 423 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 FARS2O95363 451 aaKnown RBP1.98□□□□□ -2.09
CALD1-219ENST00000480638 GFAPP14136 432 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 KLF3P57682 345 aaPredicted RBP1.98□□□□□ -2.09
CALD1-219ENST00000480638 GRB2P62993 217 aaKnown RBP1.98□□□□□ -2.09
CALD1-219ENST00000480638 MAPRE2Q15555 327 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 LDLRAD2Q5SZI1 272 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 FAM122BQ7Z309 247 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 OR2M7Q8NG81 312 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 ACTL9Q8TC94 416 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 YIPF6Q96EC8 236 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 UBE2E2Q96LR5 201 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 IGF2BP2-AS1Q96M15 143 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 OPALINQ96PE5 141 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 BPIFA3Q9BQP9 254 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 C11orf70Q9BRQ4 267 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 ABCG5Q9H222 651 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 DSN1Q9H410 356 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 REEP1Q9H902 201 aa1.98□□□□□ -2.09
CALD1-219ENST00000480638 STX18Q9P2W9 335 aaKnown RBP1.98□□□□□ -2.09
CALD1-219ENST00000480638 MCTS1Q9ULC4 181 aaKnown RBP1.98□□□□□ -2.09
CALD1-219ENST00000480638 BRCA1P38398 1863 aaKnown RBP1.97□□□□□ -2.09
CALD1-219ENST00000480638 IGLV10-54A0A075B6I4 117 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 A0A0G2JMP0 313 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 A0A0X1KG70 313 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 MYL12BO14950 172 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 AQP9O43315 295 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 MPDU1O75352 247 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 CPSF4O95639 269 aaKnown RBP1.97□□□□□ -2.09
CALD1-219ENST00000480638 CATP04040 527 aaKnown RBP1.97□□□□□ -2.09
CALD1-219ENST00000480638 RGS6P49758 472 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 ATP5G2Q06055 141 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 RAD51Q06609 339 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 FMODQ06828 376 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 TSC22D1Q15714 1073 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 PDZD11Q5EBL8 140 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 CPTPQ5TA50 214 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 OFCC1Q8IZS5 231 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 OR8K3Q8NH51 312 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 APH1AQ96BI3 265 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 OTUB2Q96DC9 234 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 MRPL48Q96GC5 212 aaKnown RBP1.97□□□□□ -2.09
CALD1-219ENST00000480638 C9orf72Q96LT7 481 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 TMEM175Q9BSA9 504 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 AUNIPQ9H7T9 357 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 LYRM4Q9HD34 91 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 CD209Q9NNX6 404 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 FAM60AQ9NP50 221 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 OR2S2Q9NQN1 319 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 PARP11Q9NR21 331 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 TMEM100Q9NV29 134 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 TBC1D24Q9ULP9 559 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 RRP15Q9Y3B9 282 aaKnown RBP1.97□□□□□ -2.09
CALD1-219ENST00000480638 SAMHD1Q9Y3Z3 626 aaKnown RBP1.97□□□□□ -2.09
CALD1-219ENST00000480638 OR51B2Q9Y5P1 312 aa1.97□□□□□ -2.09
CALD1-219ENST00000480638 A0A0B4J2E0 115 aa1.96□□□□□ -2.1
CALD1-219ENST00000480638 GOLGA8JA6NMD2 632 aa1.96□□□□□ -2.1
CALD1-219ENST00000480638 C3orf84H3BNL1 204 aa1.96□□□□□ -2.1
CALD1-219ENST00000480638 UPK1BO75841 260 aa1.96□□□□□ -2.1
CALD1-219ENST00000480638 GOLGA8HP0CJ92 632 aa1.96□□□□□ -2.1
CALD1-219ENST00000480638 FUSP35637 526 aaKnown RBP eCLIP1.96□□□□□ -2.1
CALD1-219ENST00000480638 IRF8Q02556 426 aa1.96□□□□□ -2.1
CALD1-219ENST00000480638 ADIGQ0VDE8 80 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms