RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZNF841Q6ZN19 808 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 DOK3Q7L591 496 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 NLRC3Q7RTR2 1065 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 FAM90A1Q86YD7 464 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 PACRGLQ8N7B6 248 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 SCCPDHQ8NBX0 429 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 CYGBQ8WWM9 190 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 SEH1LQ96EE3 360 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 C7orf69Q9H7B7 122 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 TRIM36Q9NQ86 728 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 C8orf4Q9NR00 106 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 CTSZQ9UBR2 303 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 OR5V1Q9UGF6 321 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 OPN4Q9UHM6 478 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 MYRFQ9Y2G1 1151 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 SRRM5B3KS81 715 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-206ENST00000478214 ADAM20O43506 726 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 WBP4O75554 376 aaKnown RBP12.99□□□□□ -0.33
HMGA1-206ENST00000478214 NRASP01111 189 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 ZNF12P17014 697 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 CFHR2P36980 270 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 KIR3DL2P43630 455 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 GMFBP60983 142 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 GNG3P63215 75 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 ELF3P78545 371 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-206ENST00000478214 PAX2Q02962 417 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 SMN1Q16637 294 aaKnown RBP12.99□□□□□ -0.33
HMGA1-206ENST00000478214 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-206ENST00000478214 ZNF691Q5VV52 312 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 TEX36Q5VZQ5 186 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 WDR25Q64LD2 544 aaPredicted RBP12.99□□□□□ -0.33
HMGA1-206ENST00000478214 TMEM42Q69YG0 159 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 Q6ZSR3 168 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 KCTD20Q7Z5Y7 419 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 LHFPL3Q86UP9 236 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 OR5A2Q8NGI9 324 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 GPR173Q9NS66 373 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 CLN8Q9UBY8 286 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 INSIG2Q9Y5U4 225 aa12.99□□□□□ -0.33
HMGA1-206ENST00000478214 A0A1B0GVI7 797 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 ERICH4A6NGS2 130 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 OR5B21A6NL26 309 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 DHRS7CA6NNS2 312 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 J3QLW9 94 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 CASQ2O14958 399 aaPredicted RBP12.98□□□□□ -0.33
HMGA1-206ENST00000478214 AKR7A2O43488 359 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 SYT7O43581 403 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 NDUFA2O43678 99 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 FADS2O95864 444 aaKnown RBP12.98□□□□□ -0.33
HMGA1-206ENST00000478214 IGHA1P01876 353 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 ZNF19P17023 458 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 NANOS3P60323 173 aaKnown RBP12.98□□□□□ -0.33
HMGA1-206ENST00000478214 ADARB1P78563 741 aaKnown RBP12.98□□□□□ -0.33
HMGA1-206ENST00000478214 RAB40BQ12829 278 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 CLVS2Q5SYC1 327 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 TTC23Q5W5X9 447 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 C1QL2Q7Z5L3 287 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 RDH10Q8IZV5 341 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 OR52I1Q8NGK6 324 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 OR10Z1Q8NGY1 313 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 OR2G2Q8NGZ5 317 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 C4orf36Q96KX1 117 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 MDFIQ99750 246 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 ADI1Q9BV57 179 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 ALG8Q9BVK2 526 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 WDR13Q9H1Z4 485 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 OR51I2Q9H344 312 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 NKX1-2Q9UD57 310 aaPredicted RBP12.98□□□□□ -0.33
HMGA1-206ENST00000478214 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 RPL36Q9Y3U8 105 aaKnown RBP12.98□□□□□ -0.33
HMGA1-206ENST00000478214 COL6A5A8TX70 2615 aa12.98□□□□□ -0.33
HMGA1-206ENST00000478214 IGHV2-70DA0A0C4DH43 119 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 LOC107986453A0A1B0GWG9 222 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 RHBDL1O75783 438 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 MUC1P15941 1255 aaPredicted RBP12.97□□□□□ -0.33
HMGA1-206ENST00000478214 GALEQ14376 348 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 MICBQ29980 383 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 DHRSXQ8N5I4 330 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 CNIH3Q8TBE1 160 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 RAB40AQ8WXH6 277 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 DACT3Q96B18 629 aaPredicted RBP12.97□□□□□ -0.33
HMGA1-206ENST00000478214 PELI1Q96FA3 418 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 TECTBQ96PL2 329 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 CCL13Q99616 98 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 ZNF649Q9BS31 505 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 DCLRE1BQ9H816 532 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 MRPS18AQ9NVS2 196 aaKnown RBP12.97□□□□□ -0.33
HMGA1-206ENST00000478214 FRRS1LQ9P0K9 344 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 ERVK-18Q9QC07 812 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 AUP1Q9Y679 476 aa12.97□□□□□ -0.33
HMGA1-206ENST00000478214 A0A1B0GW55 424 aa12.96□□□□□ -0.33
HMGA1-206ENST00000478214 C22orf46C9J442 243 aa12.96□□□□□ -0.33
HMGA1-206ENST00000478214 FCN3O75636 299 aa12.96□□□□□ -0.33
HMGA1-206ENST00000478214 HTR1AP08908 422 aa12.96□□□□□ -0.33
HMGA1-206ENST00000478214 UBCP0CG48 685 aaKnown RBP12.96□□□□□ -0.33
HMGA1-206ENST00000478214 DUX4L2P0CJ85 424 aa12.96□□□□□ -0.33
HMGA1-206ENST00000478214 DUX4L3P0CJ86 424 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms