RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 LRRC28Q86X40 367 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 KLBQ86Z14 1044 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 PHC2Q8IXK0 858 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF485Q8NCK3 441 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 C19orf18Q8NEA5 215 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 RNF133Q8WVZ7 376 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 SGK3Q96BR1 496 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 KCTD12Q96CX2 325 aaKnown RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 ISG20L2Q9H9L3 353 aaKnown RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 UFSP2Q9NUQ7 469 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 PTTG2Q9NZH5 202 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 GNG8Q9UK08 70 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 STUB1Q9UNE7 303 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 COPS3Q9UNS2 423 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 KLHDC2Q9Y2U9 406 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 DYSFO75923 2080 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.95□□□□□ -1.39e-8■■■□□ 18
HDAC6-221ENST00000477561 LOC105371242A0A075B767 164 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 PSMD9O00233 223 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF254O75437 659 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 PNPP00491 289 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 AVPP01185 164 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 CD1AP06126 327 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 GRPP07492 148 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ADRA2CP18825 462 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 CELP19835 753 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 GALP22466 123 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 GADD45AP24522 165 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ZFP36P26651 326 aaKnown RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 GABRA5P31644 462 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 OPRL1P41146 370 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 TGM4P49221 684 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 OR12D2P58182 307 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF121P58317 390 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ROM1Q03395 351 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 MPPED2Q15777 294 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 SSX1Q16384 188 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 CTF1Q16619 201 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 TP53I3Q53FA7 332 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 RPL22L1Q6P5R6 122 aaKnown RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 LRRN1Q6UXK5 716 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 C1orf229Q6ZS94 237 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 SLC16A12Q6ZSM3 486 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 USP43Q70EL4 1123 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 SSX6Q7RTT6 188 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 YIPF7Q8N8F6 280 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 BOLLQ8N9W6 283 aaKnown RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 DEFB108BQ8NET1 73 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 OR56B2PQ8NGI1 322 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 REEP6Q96HR9 211 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 PGAM5Q96HS1 289 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 OR8B4Q96RC9 309 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ADAT1Q9BUB4 502 aaKnown RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 MROQ9BYG7 248 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 TTTY10Q9BZA0 68 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 NAA50Q9GZZ1 169 aaKnown RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 METTL17Q9H7H0 456 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 PPP1R3EQ9H7J1 279 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 PATZ1Q9HBE1 687 aaKnown RBP6.95□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM165Q9HC07 324 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 G6PC2Q9NQR9 355 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF319Q9P2F9 582 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 IKZF2Q9UKS7 526 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 SSR3Q9UNL2 185 aa6.95□□□□□ -1.3
HDAC6-221ENST00000477561 MXRA5Q9NR99 2828 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 ATRQ13535 2644 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 PPIAL4EA0A075B759 164 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 A0A0G2JMP0 313 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 LOC100506127A0A0U1RQW1 187 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 A0A0X1KG70 313 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 A0A1B0GWJ7 208 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 LRRC30A6NM36 301 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 CEACAM18A8MTB9 384 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 PPIAL4DF5H284 164 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 OGG1O15527 345 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 XRCC2O43543 280 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 RGS9O75916 674 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 SERPINA3P01011 423 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 PPIAL4FP0DN26 164 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 IRF2P14316 349 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 MDH2P40926 338 aaKnown RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 CD200P41217 278 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 RIDAP52758 137 aaKnown RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 FAM3AP98173 230 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM155Q4W5P6 130 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF684Q5T5D7 378 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 DCAF12L2Q5VW00 463 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 SFRP4Q6FHJ7 346 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 DEGS2Q6QHC5 323 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 RHOUQ7L0Q8 258 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 PRSS45Q7RTY3 260 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF679Q8IYX0 411 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 SPICQ8N5J4 248 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 MS4A15Q8N5U1 240 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 OR4M2Q8NGB6 313 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 RNF166Q96A37 237 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 PELI1Q96FA3 418 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 CHCHD6Q9BRQ6 235 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms