RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 GYPAP02724 150 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 SDHBP21912 280 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 TAGLNQ01995 201 aaKnown RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 GUCA2AQ02747 115 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 EIF3IQ13347 325 aaKnown RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 TMEM147Q9BVK8 224 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 OPN1MWP04001 364 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 OPN1MW2P0DN77 364 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 OPN1MW3P0DN78 364 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 OR2T2Q6IF00 324 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 EXTL1Q92935 676 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 GNRHR2Q96P88 292 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 HSPB2A8KAH6 182 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 SPINK4O60575 86 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 HSPB2Q16082 182 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 CNRIP1Q96F85 164 aaPredicted RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 NOL4LQ96MY1 436 aaPredicted RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 GABARAPL3Q9BY60 117 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 BCL2L10Q9HD36 194 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 GATCO43716 136 aaKnown RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 SLC25A5P05141 298 aaKnown RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 RAB5AP20339 215 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 COX7A1P24310 79 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 HNRNPA3P51991 378 aaKnown RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 GAMTQ14353 236 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 OTUD1Q5VV17 481 aaPredicted RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 CADM3Q8N126 398 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 BLNKQ8WV28 456 aa16.67■□□□□ 0.26
VARS2-209ENST00000477288 KTI12Q96EK9 354 aaPredicted RBP16.67■□□□□ 0.26
VARS2-209ENST00000477288 K7EQS6 105 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 S100A8P05109 93 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 GPNMBQ14956 572 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 OR4F17Q8NGA8 305 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 WDR61Q9GZS3 305 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 LSM2Q9Y333 95 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 TRA2AQ13595 282 aaKnown RBP eCLIP16.66■□□□□ 0.26
VARS2-209ENST00000477288 TRIP6Q15654 476 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 RNASEKQ6P5S7 137 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 C1orf210Q8IVY1 113 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 ABCD3P28288 659 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 CEACAM6P40199 344 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 PLA2G2FQ9BZM2 168 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 IL21Q9HBE4 155 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 SLC25A19Q9HC21 320 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 A0A0A6YYD5 115 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 GPANK1O95872 356 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 THBS4P35443 961 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 MOB1BQ7L9L4 216 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 SCN7AQ01118 1682 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 MAP1BP46821 2468 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 ZNF716A6NP11 495 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 LINC01387J3KSC0 135 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 HSBP1O75506 76 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 PTBP3O95758 552 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 EPHA2P29317 976 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 RPL34P49207 117 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 METAP1P53582 386 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 TPPP2P59282 170 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 RNPS1Q15287 305 aaKnown RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 CLEC9AQ6UXN8 241 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 ZNF574Q6ZN55 896 aaPredicted RBP16.66■□□□□ 0.26
VARS2-209ENST00000477288 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
VARS2-209ENST00000477288 TOGARAM1Q9Y4F4 1720 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 BMPR1BO00238 502 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 LHX8Q68G74 356 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 LYG1Q8N1E2 194 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 TMEM56Q96MV1 263 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 TMEM30AQ9NV96 361 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 ZMAT5Q9UDW3 170 aaKnown RBP16.65■□□□□ 0.26
VARS2-209ENST00000477288 FCGR3BO75015 233 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 IGLV3-25P01717 112 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 SPNS1Q9H2V7 528 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 SPINK9Q5DT21 86 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 TMEM88Q6PEY1 159 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 BAP18Q8IXM2 172 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 PPP1R1CQ8WVI7 109 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 OR2G2Q8NGZ5 317 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 OR1L3Q8NH93 324 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 LIMK1P53667 647 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 PPP1CBP62140 327 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 IL11RAQ14626 422 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 ANKRD53Q8N9V6 530 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 TRAPPC1Q9Y5R8 145 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 PHIPQ8WWQ0 1821 aa16.65■□□□□ 0.26
VARS2-209ENST00000477288 CA6P23280 308 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 TMEM211Q6ICI0 200 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 TMEM65Q6PI78 240 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 OR4C16Q8NGL9 310 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 OR4C3Q8NH37 302 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 HGDQ93099 445 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 CDCA4Q9BXL8 241 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 WNT16Q9UBV4 365 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 A0A1W2PRD5 423 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 A0A1W2PRF3 423 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 A0A1W2PRM7 423 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 SLC25A35Q3KQZ1 300 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 C20orf196Q8IYI0 205 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 VN1R1Q9GZP7 353 aa16.64■□□□□ 0.25
VARS2-209ENST00000477288 HMX2A2RU54 273 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms