RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ZNF695Q8IW36 515 aa12.1□□□□□ -0.47
SMG5-204ENST00000476954 CD177Q8N6Q3 437 aa12.1□□□□□ -0.47
SMG5-204ENST00000476954 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
SMG5-204ENST00000476954 OR11H6Q8NGC7 330 aa12.1□□□□□ -0.47
SMG5-204ENST00000476954 SPSB4Q96A44 273 aa12.1□□□□□ -0.47
SMG5-204ENST00000476954 SDSLQ96GA7 329 aa12.1□□□□□ -0.47
SMG5-204ENST00000476954 NOL4LQ96MY1 436 aaPredicted RBP12.1□□□□□ -0.47
SMG5-204ENST00000476954 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
SMG5-204ENST00000476954 LIN7BQ9HAP6 207 aa12.1□□□□□ -0.47
SMG5-204ENST00000476954 hCG_1809904A0A1W2PP81 198 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 A0A1W2PPE2 198 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 A0A1W2PR64 198 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 A0A1W2PRV1 198 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 FFAR1O14842 300 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 TBX1O43435 398 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 NDUFB2O95178 105 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 DDOSTP39656 456 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 OR3A4PP47883 348 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 SEC23BQ15437 767 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 DNM1P34Q6PK57 102 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 EPGNQ6UW88 154 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 CYB561A3Q8NBI2 242 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 SGK3Q96BR1 496 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
SMG5-204ENST00000476954 NMNAT3Q96T66 252 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 MICU1Q9BPX6 476 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 SSU72Q9NP77 194 aaKnown RBP12.09□□□□□ -0.47
SMG5-204ENST00000476954 SIGLEC7Q9Y286 467 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 DNAH10Q8IVF4 4471 aa12.09□□□□□ -0.47
SMG5-204ENST00000476954 A0A1W2PPH5 198 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 HLA-DQA2P01906 255 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 HCKP08631 526 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 TROVE2P10155 538 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMG5-204ENST00000476954 DCTDP32321 178 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 VEGFCP49767 419 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 TRAM2Q15035 370 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 ZNF260Q3ZCT1 412 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 SLC36A3Q495N2 470 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 ZNF730Q6ZMV8 503 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 KCTD8Q6ZWB6 473 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 MBOAT2Q6ZWT7 520 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 C16orf82Q7Z2V1 217 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 THAP5Q7Z6K1 395 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 OFCC1Q8IZS5 231 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 MREGQ8N565 214 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 NDNFQ8TB73 568 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 CAPSLQ8WWF8 208 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 TM2D3Q9BRN9 247 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 NSRP1Q9H0G5 558 aaKnown RBP12.08□□□□□ -0.48
SMG5-204ENST00000476954 RPRD1BQ9NQG5 326 aaKnown RBP12.08□□□□□ -0.48
SMG5-204ENST00000476954 LINC00527Q9UJ94 153 aa12.08□□□□□ -0.48
SMG5-204ENST00000476954 hCG_38984A0A1B0GV85 526 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 XRCC2O43543 280 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 TXNDC12O95881 172 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 GSK3AP49840 483 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 CYBRD1Q53TN4 286 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 LYPD4Q6UWN0 246 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 OR5P3Q8WZ94 311 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 REEP6Q96HR9 211 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 TPD52L3Q96J77 140 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 GPX7Q96SL4 187 aaPredicted RBP12.07□□□□□ -0.48
SMG5-204ENST00000476954 EBF4Q9BQW3 602 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 COPS4Q9BT78 406 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 OPA3Q9H6K4 179 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 ZFP57Q9NU63 452 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 TBC1D23Q9NUY8 699 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 LYVE1Q9Y5Y7 322 aa12.07□□□□□ -0.48
SMG5-204ENST00000476954 TVP23AA6NH52 213 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 RFPL4AA6NLU0 287 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 RFPL4AL1F8VTS6 287 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 OR2F2O95006 317 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 NOS3P29474 1203 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 SLC6A1P30531 599 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 SLC7A2P52569 658 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 PRDX4Q13162 271 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 TIGD6Q17RP2 521 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 KRT71Q3SY84 523 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 C16orf89Q6UX73 402 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 LCNL1Q6ZST4 164 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 RNF113BQ8IZP6 322 aaKnown RBP12.06□□□□□ -0.48
SMG5-204ENST00000476954 OR4K13Q8NH42 304 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 HPSE2Q8WWQ2 592 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 LZICQ8WZA0 190 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
SMG5-204ENST00000476954 CDRT15Q96T59 188 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 HECTD4Q9Y4D8 3996 aa12.06□□□□□ -0.48
SMG5-204ENST00000476954 TMEM210A6NLX4 147 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 ANXA2P2A6NMY6 339 aa12.05□□□□□ -0.48
SMG5-204ENST00000476954 MTRF1O75570 445 aaKnown RBP12.05□□□□□ -0.48
SMG5-204ENST00000476954 ZNF823P16415 610 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms