RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ENDOGQ14249 297 aaKnown RBP9.84□□□□□ -0.83
VAPB-204ENST00000475243 DUS3LQ96G46 650 aaKnown RBP9.84□□□□□ -0.83
VAPB-204ENST00000475243 POM121L2Q96KW2 1035 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 CABLES2Q9BTV7 478 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 M0R1X1 148 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 ZNF17P17021 662 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 RPL34P49207 117 aaKnown RBP9.84□□□□□ -0.83
VAPB-204ENST00000475243 LYG2Q86SG7 212 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 C2orf50Q96LR7 162 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 P4HTMQ9NXG6 502 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 MYO16Q9Y6X6 1858 aa9.84□□□□□ -0.83
VAPB-204ENST00000475243 C3orf80F5H4A9 247 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 CRYABP02511 175 aaKnown RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 S100A4P26447 101 aaKnown RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 SPINK14Q6IE38 97 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 OR4C3Q8NH37 302 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 EDARADDQ8WWZ3 215 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 TRPM3Q9HCF6 1732 aaPredicted RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 TNRC6CQ9HCJ0 1690 aaKnown RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 ZNF320A2RRD8 509 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 AQP6Q13520 282 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 Q56UQ5 140 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 OR1L3Q8NH93 324 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 GSX2Q9BZM3 304 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 DICER1Q9UPY3 1922 aaKnown RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 PYCARD-AS1I3L0S3 204 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 RAE1P78406 368 aaKnown RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 TFF2Q03403 129 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 ZNF793Q6ZN11 406 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 TTC9Q92623 222 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 APOBEC3DQ96AK3 386 aaPredicted RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 OR51I2Q9H344 312 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 ZNF629Q9UEG4 869 aaPredicted RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 ICAM5Q9UMF0 924 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 KPTNQ9Y664 436 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 ADRB1P08588 477 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 SBK3P0C264 359 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 SYS1Q8N2H4 156 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 M1APQ8TC57 530 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 COX5AP20674 150 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 MPLP40238 635 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 LIMK1P53667 647 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 PPP1CAP62136 330 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 ZNF528Q3MIS6 628 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 FOCADQ5VW36 1801 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 TSPAN12O95859 305 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 OPN1MWP04001 364 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 OPN1MW2P0DN77 364 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 OPN1MW3P0DN78 364 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 SLC38A6Q8IZM9 456 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 LYG1Q8N1E2 194 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 GALNT16Q8N428 558 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 FAAP24Q9BTP7 215 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 NXF2Q9GZY0 626 aaKnown RBP9.83□□□□□ -0.84
VAPB-204ENST00000475243 C12orf10Q9HB07 376 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 M0QZ24 198 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 CTSVO60911 334 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 SCO1O75880 301 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 HPP00738 406 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 PATE4P0C8F1 98 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 AVPR2P30518 371 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 OPRK1P41145 380 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 FZD5Q13467 585 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 EXTL1Q92935 676 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 PRDM7Q9NQW5 492 aa9.83□□□□□ -0.84
VAPB-204ENST00000475243 NME1P15531 152 aaKnown RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 SPNP16150 400 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 MICBQ29980 383 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 OR2A2Q6IF42 318 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 ZG16BQ96DA0 208 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 PELI1Q96FA3 418 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 ARHGDIGQ99819 225 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 C20orf141Q9NUB4 165 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 A0A1W2PRD5 423 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 A0A1W2PRF3 423 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 A0A1W2PRM7 423 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 XKRY2A2RUG3 117 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 DHRS7BQ6IAN0 325 aaPredicted RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 TP53I13Q8NBR0 393 aaPredicted RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 CIB3Q96Q77 187 aaPredicted RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 SPINK4O60575 86 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 HOXB3P14651 431 aaPredicted RBP9.82□□□□□ -0.84
VAPB-204ENST00000475243 CD1EP15812 388 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 ZNF774Q6NX45 483 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 CMTM3Q96MX0 182 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 HES4Q9HCC6 221 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 ADAMTSL3P82987 1691 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 LILRA5A6NI73 299 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 MBP02144 154 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 LINC00303Q3SY05 128 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 TMEM92Q6UXU6 159 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 Q6ZNX1 250 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 OTOSQ8NHW6 89 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 ARHGAP5-AS1Q96IT6 56 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 NAGKQ9UJ70 344 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 IGHV3-43A0A0B4J1X8 118 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 A0A1W2PPQ1 181 aa9.82□□□□□ -0.84
VAPB-204ENST00000475243 IGHV3-43DP0DP04 118 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms