RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 C19orf18Q8NEA5 215 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 DEFB108BQ8NET1 73 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-216ENST00000475195 JAM3Q9BX67 310 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 OR51I2Q9H344 312 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 METTL17Q9H7H0 456 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-216ENST00000475195 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 FGF20Q9NP95 211 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-216ENST00000475195 INPP5EQ9NRR6 644 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 ACOXLQ9NUZ1 547 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 OPN4Q9UHM6 478 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 INSIG2Q9Y5U4 225 aa13.74□□□□□ -0.21
ATG4B-216ENST00000475195 COL6A5A8TX70 2615 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 OR5B21A6NL26 309 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 NRASP01111 189 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 ISG15P05161 165 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 RPS2P15880 293 aaKnown RBP13.73□□□□□ -0.21
ATG4B-216ENST00000475195 ZNF12P17014 697 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 EGR1P18146 543 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 KIR3DL2P43630 455 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 NPY4RP50391 375 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 CCR9P51686 369 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 OR12D2P58182 307 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 GNG3P63215 75 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 WDR38Q5JTN6 314 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 CLVS2Q5SYC1 327 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 ZNF771Q7L3S4 317 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-216ENST00000475195 COMMD2Q86X83 199 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 FAM90A1Q86YD7 464 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 SYS1Q8N2H4 156 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 DHRSXQ8N5I4 330 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 TEX29Q8N6K0 151 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 OR8B3Q8NGG8 313 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 OR2G2Q8NGZ5 317 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 LRRC29Q8WV35 223 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 RPL3LQ92901 407 aaKnown RBP13.73□□□□□ -0.21
ATG4B-216ENST00000475195 C12orf43Q96C57 262 aaKnown RBP13.73□□□□□ -0.21
ATG4B-216ENST00000475195 C10orf35Q96D05 121 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 OR8B2Q96RD0 313 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 SSBP3Q9BWW4 388 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-216ENST00000475195 FRRS1LQ9P0K9 344 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 GNG8Q9UK08 70 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 HSPE1-MOB4S4R3N1 261 aa13.73□□□□□ -0.21
ATG4B-216ENST00000475195 ZNF732B4DXR9 585 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 H0YAE9 185 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 PHF1O43189 567 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-216ENST00000475195 CD80P33681 288 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 GPM6AP51674 278 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 ACTA2P62736 377 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 ACTG2P63267 376 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 PAX8Q06710 450 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 IL18R1Q13478 541 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 CEP78Q5JTW2 689 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 ATPAF1Q5TC12 328 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-216ENST00000475195 WDR25Q64LD2 544 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-216ENST00000475195 MOB3CQ70IA8 216 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 NLRC3Q7RTR2 1065 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 FAM220AQ7Z4H9 259 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 LHFPL3Q86UP9 236 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 OR52I1Q8NGK6 324 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 PELI1Q96FA3 418 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 C7orf69Q9H7B7 122 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 ERVK13-1Q9NX77 482 aa13.72□□□□□ -0.21
ATG4B-216ENST00000475195 KIR2DS1A0A191URI9 304 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 A0A1B0GVI7 797 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 hCG_1807616A0A1W2PRN6 198 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 C3orf80F5H4A9 247 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 SYT7O43581 403 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 CLIC3O95833 236 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 FSHBP01225 129 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 UBCP0CG48 685 aaKnown RBP13.71□□□□□ -0.21
ATG4B-216ENST00000475195 PITPNBP48739 271 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 NANOS3P60323 173 aaKnown RBP13.71□□□□□ -0.21
ATG4B-216ENST00000475195 GNB2P62879 340 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 SMN1Q16637 294 aaKnown RBP13.71□□□□□ -0.21
ATG4B-216ENST00000475195 MICBQ29980 383 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 TMEM244Q5VVB8 128 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 BOLLQ8N9W6 283 aaKnown RBP13.71□□□□□ -0.21
ATG4B-216ENST00000475195 SETD9Q8NE22 299 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 AQP3Q92482 292 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 MRPL48Q96GC5 212 aaKnown RBP13.71□□□□□ -0.21
ATG4B-216ENST00000475195 ALG8Q9BVK2 526 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 ERVK-18Q9QC07 812 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 CLN8Q9UBY8 286 aa13.71□□□□□ -0.21
ATG4B-216ENST00000475195 NKX1-2Q9UD57 310 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-216ENST00000475195 PQLC2LA1A4F0 135 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 J3QLW9 94 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 FCN3O75636 299 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 GYPAP02724 150 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 ACAA1P09110 424 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-216ENST00000475195 LIMS3P0CW19 117 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 LIMS4P0CW20 117 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 PPIAL4GP0DN37 164 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 ZNF19P17023 458 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 AMY2BP19961 511 aa13.7□□□□□ -0.22
ATG4B-216ENST00000475195 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms