RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 AWAT1Q58HT5 328 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 PRAMEF6Q5VXH4 476 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 DCDC5Q6ZRR9 648 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 SSX6Q7RTT6 188 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 ZDHHC22Q8N966 263 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 SPERTQ8NA61 448 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 SGMS2Q8NHU3 365 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 FAM71F1Q96KD3 344 aaPredicted RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 NUDT16L1Q9BRJ7 211 aaKnown RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 JAM3Q9BX67 310 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 MOB1AQ9H8S9 216 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 ESM1Q9NQ30 184 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 C14orf119Q9NWQ9 140 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 FAM206AQ9NX38 181 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 CNOT2Q9NZN8 540 aaKnown RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 RNF7Q9UBF6 113 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 MRM2Q9UI43 246 aaKnown RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 R4GMQ9 66 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 ANXA2P2A6NMY6 339 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
VARS-223ENST00000474643 GRPP07492 148 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 DBTP11182 482 aaKnown RBP12.63□□□□□ -0.39
VARS-223ENST00000474643 PRTN3P24158 256 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 CD200P41217 278 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 GATA4P43694 442 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 MAP2K3P46734 347 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 ZNF91Q05481 1191 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
VARS-223ENST00000474643 TP53I3Q53FA7 332 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 FAM201AQ5SY85 155 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 C6orf141Q5SZD1 244 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 GPR157Q5UAW9 335 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 DOK3Q7L591 496 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 C19orf18Q8NEA5 215 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 OR51E1Q8TCB6 317 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 PIGCQ92535 297 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 HIST1H2AAQ96QV6 131 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 AMBNQ9NP70 447 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 GPR84Q9NQS5 396 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 INPP5EQ9NRR6 644 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 ERVK-18Q9QC07 812 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 OR52A1Q9UKL2 312 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 EXOGQ9Y2C4 368 aaKnown RBP12.63□□□□□ -0.39
VARS-223ENST00000474643 SNX5Q9Y5X3 404 aa12.63□□□□□ -0.39
VARS-223ENST00000474643 ARHGAP32A7KAX9 2087 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 A0A0U1RQV5 110 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 EFCAB10A6NFE3 127 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 SPRY1O43609 319 aaPredicted RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 MTRF1O75570 445 aaKnown RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 SULT1C4O75897 302 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 FADS2O95864 444 aaKnown RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 CD80P33681 288 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 PAX8Q06710 450 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 MAB21L1Q13394 359 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 ODF4Q2M2E3 257 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 RBM48Q5RL73 367 aaKnown RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 CD276Q5ZPR3 534 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 SFRP4Q6FHJ7 346 aaPredicted RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 KCTD8Q6ZWB6 473 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 ACBD7Q8N6N7 88 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 Q8TCH9 128 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 LGALS12Q96DT0 336 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 LYZL4Q96KX0 146 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 MICU1Q9BPX6 476 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 C1orf123Q9NWV4 160 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 SCN3BQ9NY72 215 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 NUFIP1Q9UHK0 495 aaKnown RBP12.62□□□□□ -0.39
VARS-223ENST00000474643 BLOC1S6Q9UL45 172 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 RHBDD3Q9Y3P4 386 aa12.62□□□□□ -0.39
VARS-223ENST00000474643 TRAV38-1A0A0B4J264 116 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 ZNF850A8MQ14 1090 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 J3QRE1 110 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 ADAM20O43506 726 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 MRPS14O60783 128 aaKnown RBP12.61□□□□□ -0.39
VARS-223ENST00000474643 PPIAL4GP0DN37 164 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 IGHV4-38-2P0DP08 117 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 DCKP27707 260 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 NPY4RP50391 375 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 ZNF85Q03923 595 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 MPPED2Q15777 294 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 KLF17Q5JT82 389 aaPredicted RBP12.61□□□□□ -0.39
VARS-223ENST00000474643 RNLSQ5VYX0 342 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 CNIH3Q8TBE1 160 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 PPP1R14AQ96A00 147 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 CNBD2Q96M20 576 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 PCGF1Q9BSM1 259 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 RTL8AQ9BWD3 113 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 ABCB9Q9NP78 766 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
VARS-223ENST00000474643 FKBP14Q9NWM8 211 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 TPRKBQ9Y3C4 175 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 MPC1Q9Y5U8 109 aa12.61□□□□□ -0.39
VARS-223ENST00000474643 TENM1Q9UKZ4 2725 aa12.6□□□□□ -0.39
VARS-223ENST00000474643 ZNF816-ZNF321PA0A0X1KG74 233 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms