RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 NBASA2RRP1 2371 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 OR5B21A6NL26 309 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 VGLL3A8MV65 326 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 IQCF6A8MYZ5 107 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 M0R1B8 84 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 XRCC3O43542 346 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF780AO75290 641 aaPredicted RBP11.03□□□□□ -0.64
VPS13D-205ENST00000473099 CTAG2O75638 210 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 FAM157BP0CG42 384 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 NAT2P11245 290 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 IL7P13232 177 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 PTGFRP43088 359 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 ZNF83P51522 516 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 MTCP1P56278 107 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 PRDX4Q13162 271 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 HLXQ14774 488 aaPredicted RBP11.03□□□□□ -0.64
VPS13D-205ENST00000473099 CEACAM21Q3KPI0 293 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 TMEM69Q5SWH9 247 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 TRIQKQ629K1 86 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 LYSMD2Q8IV50 215 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 ZSCAN4Q8NAM6 433 aaPredicted RBP11.03□□□□□ -0.64
VPS13D-205ENST00000473099 GALNT11Q8NCW6 608 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 SLC25A40Q8TBP6 338 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 C1QTNF6Q9BXI9 259 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
VPS13D-205ENST00000473099 CHD3Q12873 2000 aaKnown RBP11.02□□□□□ -0.64
VPS13D-205ENST00000473099 A0A0G2JMP0 313 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 A0A0X1KG70 313 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 ZNF850A8MQ14 1090 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM14DPA8MWL7 114 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 GSTZ1O43708 216 aaPredicted RBP11.02□□□□□ -0.65
VPS13D-205ENST00000473099 HLA-DQB1P01920 261 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 KITLGP21583 273 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 CDK2P24941 298 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 PTAFRP25105 342 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 GCH1P30793 250 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 CCKARP32238 428 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 OR3A4PP47883 348 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 INPP1P49441 399 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 QRFPP83859 136 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 MBNL2Q5VZF2 373 aaKnown RBP11.02□□□□□ -0.65
VPS13D-205ENST00000473099 GLIPR1L1Q6UWM5 242 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 NCCRP1Q6ZVX7 275 aaPredicted RBP11.02□□□□□ -0.65
VPS13D-205ENST00000473099 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 PXT1Q8NFP0 134 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 OR4M2Q8NGB6 313 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 NPRL2Q8WTW4 380 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 TNFAIP8L1Q8WVP5 186 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 RNASE6Q93091 150 aaKnown RBP11.02□□□□□ -0.65
VPS13D-205ENST00000473099 FAM46BQ96A09 425 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 CMBLQ96DG6 245 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.65
VPS13D-205ENST00000473099 POM121Q96HA1 1249 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 SPACA5Q96QH8 159 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 URM1Q9BTM9 101 aaKnown RBP11.02□□□□□ -0.65
VPS13D-205ENST00000473099 OR2J1Q9GZK6 312 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 ATG5Q9H1Y0 275 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 OR51B6Q9H340 312 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 POFUT1Q9H488 388 aa11.02□□□□□ -0.65
VPS13D-205ENST00000473099 FAM230AA0A1W2PPH8 454 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 GABARAPH6UMI1 98 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 CHRM2P08172 466 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 CSF3P09919 207 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 VSIG8P0DPA2 414 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 PLA2G2AP14555 144 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 GLRXP35754 106 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 ZP1P60852 638 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 SORDQ00796 357 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 STEAP3Q658P3 488 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 OR2T2Q6IF00 324 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 RGS7BPQ6MZT1 257 aaPredicted RBP11.01□□□□□ -0.65
VPS13D-205ENST00000473099 ASCL4Q6XD76 172 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 SAXO1Q8IYX7 474 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 LILRB4Q8NHJ6 448 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 KLF14Q8TD94 323 aaPredicted RBP11.01□□□□□ -0.65
VPS13D-205ENST00000473099 SMIM4Q8WVI0 70 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 RFT1Q96AA3 541 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 MRPS24Q96EL2 167 aaKnown RBP11.01□□□□□ -0.65
VPS13D-205ENST00000473099 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM59Q9BXS4 323 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 METTL9Q9H1A3 318 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 ASH1LQ9NR48 2969 aaKnown RBP11.01□□□□□ -0.65
VPS13D-205ENST00000473099 IL36GQ9NZH8 169 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 NPAP1Q9NZP6 1156 aa11.01□□□□□ -0.65
VPS13D-205ENST00000473099 ERRFI1Q9UJM3 462 aaPredicted RBP11.01□□□□□ -0.65
VPS13D-205ENST00000473099 MRPS7Q9Y2R9 242 aaKnown RBP11.01□□□□□ -0.65
VPS13D-205ENST00000473099 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11□□□□□ -0.65
VPS13D-205ENST00000473099 PQLC2LA1A4F0 135 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 SULT1C2O00338 296 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 KDM4BO94953 1096 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 PTTG1O95997 202 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 CYB5AP00167 134 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM225BP0DP42 221 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 CD40P25942 277 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 CALCRP30988 508 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 TAS2R20P59543 309 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 GNG3P63215 75 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms