RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CLDN22Q8N7P3 220 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 SDR9C7Q8NEX9 313 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR2M7Q8NG81 312 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR11H1Q8NG94 326 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR4K2Q8NGD2 314 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR10W1Q8NGF6 305 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR1L6Q8NGR2 347 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR2Y1Q8NGV0 311 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR6K2Q8NGY2 324 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR11H2Q8NH07 326 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 COQ8AQ8NI60 647 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 GRPEL2Q8TAA5 225 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 C16orf78Q8WTQ4 265 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 C12orf43Q96C57 262 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 DCPSQ96C86 337 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 PELI1Q96FA3 418 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 SFRP2Q96HF1 295 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM56Q96MV1 263 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 PFDN5Q99471 154 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TSNAXQ99598 290 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 MICU1Q9BPX6 476 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ECSITQ9BQ95 431 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 NDUFAF3Q9BU61 184 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 BEX2Q9BXY8 128 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 NAT10Q9H0A0 1025 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 ING2Q9H160 280 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 BOLA2Q9H3K6 86 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 DHX35Q9H5Z1 703 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM38AQ9H6F2 299 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMBIM4Q9HC24 238 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM138Q9NPI0 162 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 GPATCH2LQ9NWQ4 482 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ZNF391Q9UJN7 358 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TFR2Q9UP52 801 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 RNF6Q9Y252 685 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 GOLT1BQ9Y3E0 138 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 USH1CQ9Y6N9 552 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM56-RWDD3S4R434 201 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 V9GYY9 64 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 METP08581 1390 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 FLT4P35916 1363 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 SNAPC4Q5SXM2 1469 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 RAPGEF2Q9Y4G8 1499 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 SYNMO15061 1565 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TTC37Q6PGP7 1564 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 THSD7BQ9C0I4 1608 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 TRAV8-7A0A075B6U6 113 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 C9orf170A2RU37 121 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 CCDC182A6NF36 153 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 TRDCB7Z8K6 153 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 LOC110117498-PIK3R3F6TDL0 507 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 H3BTX0 84 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 K7EP13 123 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 SULT1C2O00338 296 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 PPP1R2P9O14990 202 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 PPIHO43447 177 aaKnown RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 HLA-AP01891 365 aaKnown RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 HLA-HP01893 362 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 IFNW1P05000 195 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 ISG15P05161 165 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 KLK3P07288 261 aaPredicted RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 C8orf88P0DMB2 117 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 C1GALT1C1LP0DN25 315 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 ZNF35P13682 527 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 UQCRBP14927 111 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 HIST1H1CP16403 213 aaKnown RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 KITLGP21583 273 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 BCKDHBP21953 392 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 CD1CP29017 333 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 SLC6A1P30531 599 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 RBM34P42696 430 aaKnown RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 KIR2DS2P43631 304 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 GPR1P46091 355 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 CSNK1A1P48729 337 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 CX3CR1P49238 355 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 TTPAP49638 278 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 LHX2P50458 406 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 EFNB2P52799 333 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 CRYBA4P53673 196 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 VSX2P58304 361 aaPredicted RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 OR2B8PP59922 312 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 UBE2KP61086 200 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 RND3P61587 244 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 NUTF2P61970 127 aaKnown RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 ERVK-8P63133 956 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 SEMG2Q02383 582 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 ST3GAL3Q11203 375 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 MLLT11Q13015 90 aaPredicted RBP2.43□□□□□ -2.02
CD46-213ENST00000471987 ZNF154Q13106 437 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 UNC119Q13432 240 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 LY6EQ16553 131 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 GGTA1PQ4G0N0 100 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 SAXO2Q658L1 398 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 KCTD16Q68DU8 428 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 TMEM42Q69YG0 159 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 UQCC3Q6UW78 93 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 DRAM2Q6UX65 266 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 SLC36A1Q7Z2H8 476 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 OR2W3Q7Z3T1 314 aa2.43□□□□□ -2.02
CD46-213ENST00000471987 FAM220AQ7Z4H9 259 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms