RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CT45A7P0DMV0 189 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF17P17021 662 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF19P17023 458 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ELK4P28324 431 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 RPA3P35244 121 aaPredicted RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 HRH1P35367 487 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 IFNGR2P38484 337 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 PTGDSP41222 190 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 RPL5P46777 297 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF121P58317 390 aaPredicted RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 RND3P61587 244 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 RPS27AP62979 156 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF45Q02386 682 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 EIF4EBP2Q13542 120 aaPredicted RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 CT45A1Q5HYN5 189 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 LINC00242Q5T6M2 205 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 TPTE2P1Q5T6R2 138 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 C12orf54Q6X4T0 127 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 THOC6Q86W42 341 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 NIT1Q86X76 327 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 NATD1Q8N6N6 113 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 METTL13Q8N6R0 699 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 OR6T1Q8NGN1 323 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 CT45A3Q8NHU0 189 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 FLVCR1-AS1Q8TAF5 88 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 C16orf78Q8WTQ4 265 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 RCN3Q96D15 328 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 TCEAL4Q96EI5 215 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 SFRP2Q96HF1 295 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 VAT1Q99536 393 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 TSC22D3Q99576 134 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 DOK1Q99704 481 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 GABRG3Q99928 467 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 PDCD1LG2Q9BQ51 273 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 MRPL45Q9BRJ2 306 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 OSBPL11Q9BXB4 747 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 REEP1Q9H902 201 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 AMBNQ9NP70 447 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF446Q9NWS9 450 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 TAS2R13Q9NYV9 303 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 THYN1Q9P016 225 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 CD84Q9UIB8 345 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 CES1P1Q9UKY3 287 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 MMP17Q9ULZ9 603 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 KLF12Q9Y4X4 402 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 TDRD6O60522 2096 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 IGLV3-22A0A075B6J6 115 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TGIF2-C20orf24A0A0A6YYL0 155 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 SYCE1LA8MT33 242 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 M0QZK8 103 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 SULT2B1O00204 365 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TYROBPO43914 113 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 FRAT2O75474 233 aaPredicted RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 CD8AP01732 235 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 CRHP06850 196 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 CTSLP07711 333 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 CST2P09228 141 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TFPTP0C1Z6 253 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 LINC00614P0C842 121 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ICAM2P13598 275 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TCP1P17987 556 aaKnown RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 GABRG2P18507 467 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ALOX5APP20292 161 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 RAB5AP20339 215 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 WARSP23381 471 aaKnown RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ADORA1P30542 326 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 GABRA4P48169 554 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TTPAP49638 278 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 SULT1A1P50225 295 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 SULT1A2P50226 295 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 GPM6AP51674 278 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 LIM2P55344 173 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 AP1S1P61966 158 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 PSPHP78330 225 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 BCL2L1Q07817 233 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ATP6AP1Q15904 470 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ZIC1Q15915 447 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 HLA-DRB5Q30154 266 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 MS4A13Q5J8X5 152 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 VAX1Q5SQQ9 334 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 EPGNQ6UW88 154 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TFAP2EQ6VUC0 442 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 PRSS41Q7RTY9 318 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC36A1Q7Z2H8 476 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM19A5Q7Z5A7 132 aaPredicted RBP3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TMEM150AQ86TG1 271 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 PIANPQ8IYJ0 282 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ARRDC1Q8N5I2 433 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 Q8N7P7 452 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 HSD17B11Q8NBQ5 300 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 OR5AR1Q8NGP9 310 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 COQ8AQ8NI60 647 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 HAVCR2Q8TDQ0 301 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 TMEM234Q8WY98 164 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 ARPC1AQ92747 370 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 FGF11Q92914 225 aa3.55□□□□□ -1.84
PRPF40A-206ENST00000471167 DNAJC19Q96DA6 116 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms