RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ZNF14P17017 642 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 GGT2P36268 569 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 PPOXP50336 477 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 PDLIM4P50479 330 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 EFNA4P52798 201 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 SLC25A1P53007 311 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 CRISP1P54107 249 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 PPP1CBP62140 327 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 SLC3A1Q07837 685 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 PPP1R8Q12972 351 aaKnown RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 MED21Q13503 144 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 EIF2B1Q14232 305 aaKnown RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 CLEC12BQ2HXU8 276 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 IQCCQ4KMZ1 466 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 ELFN2Q5R3F8 820 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 ZBTB49Q6ZSB9 765 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 ASRGL1Q7L266 308 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 MRPL21Q7Z2W9 205 aaKnown RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 COMMD2Q86X83 199 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 ERI1Q8IV48 349 aaKnown RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 PARP8Q8N3A8 854 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 LRRC75AQ8NAA5 344 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 CYB561A3Q8NBI2 242 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF114Q8NC26 417 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 OR6N2Q8NGY6 317 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 OR1F12Q8NHA8 337 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 AKR7LQ8NHP1 331 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 TMED6Q8WW62 240 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 NRGNQ92686 78 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 NEUROG1Q92886 237 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 MRPL24Q96A35 216 aaKnown RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 APOBEC3DQ96AK3 386 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 LYZL4Q96KX0 146 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 C4orf45Q96LM5 186 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 Q96MT0 163 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 COQ7Q99807 217 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 NIPSNAP1Q9BPW8 284 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 TRAF4Q9BUZ4 470 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-208ENST00000469585 SEMA6AQ9H2E6 1030 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 OR51B6Q9H340 312 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 FN3KQ9H479 309 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 CENPMQ9NSP4 180 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 TVP23BQ9NYZ1 205 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 FBXL17Q9UF56 701 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 LAMP5Q9UJQ1 280 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 B9D1Q9UPM9 204 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 E7EQL1 145 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 F5H5K5 113 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 NDUFS8O00217 210 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF593O00488 134 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 BHLHE40O14503 412 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SSX4O60224 188 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 GLCEO94923 617 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 PATE4P0C8F1 98 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 IRF2P14316 349 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SLC25A16P16260 332 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 PRKACGP22612 351 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 CDKN1AP38936 164 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 BRWD1-AS2P59051 145 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 KRTAP10-9P60411 292 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 PPP2R2BQ00005 443 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 PSG4Q00888 419 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SPOCK1Q08629 439 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 CRMP1Q14194 572 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF829Q3KNS6 432 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF770Q6IQ21 691 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF774Q6NX45 483 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 PLBD1Q6P4A8 553 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SPNS3Q6ZMD2 512 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 FAM220AQ7Z4H9 259 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 TSEN54Q7Z6J9 526 aaKnown RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 KRT77Q7Z794 578 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 OR6V1Q8N148 313 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF283Q8N7M2 679 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SLC37A3Q8NCC5 494 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 CSNK2A3Q8NEV1 391 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 OR2AK2Q8NG84 335 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 OR9Q1Q8NGQ5 310 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 THEM6Q8WUY1 208 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SPRYD4Q8WW59 207 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ASB17Q8WXJ9 295 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 DUS3LQ96G46 650 aaKnown RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF582Q96NG8 517 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 FOXN4Q96NZ1 517 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 CNN2Q99439 309 aaKnown RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 APOL4Q9BPW4 351 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 MROQ9BYG7 248 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SLC22A4Q9H015 551 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 NIPAL2Q9H841 368 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 SEBOXQ9HB31 216 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 CLN6Q9NWW5 311 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 B3GNT2Q9NY97 397 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 C1RLQ9NZP8 487 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 TAAR3PQ9P1P4 343 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 PCDHGB1Q9Y5G3 927 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 N6AMT1Q9Y5N5 214 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms