RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 PVRP15151 417 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 HPGDP15428 266 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 TCN2P20062 427 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 CD80P33681 288 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 MAS1LP35410 378 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 GLP1RP43220 463 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 PPT1P50897 306 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 UCP2P55851 309 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 UNC119Q13432 240 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SGCBQ16585 318 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM268Q5VZI3 342 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 CBLN3Q6UW01 205 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SLC29A4Q7RTT9 530 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 PEG10Q86TG7 708 aaKnown RBP8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SLC22A24Q8N4F4 322 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 POC1AQ8NBT0 407 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 CHST4Q8NCG5 386 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 OR9A4Q8NGU2 314 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF563Q8TA94 476 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 NUBPLQ8TB37 319 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM230Q96A57 120 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 CPNE2Q96FN4 548 aaPredicted RBP8.46□□□□□ -1.05
HDAC3-205ENST00000469550 TMEM41AQ96HV5 264 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 OCSTAMPQ9BR26 566 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 TXNIPQ9H3M7 391 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 C5orf66Q9H5L9 145 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 TAF9BQ9HBM6 251 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 OR5AC2Q9NZP5 309 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 OR52A1Q9UKL2 312 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 STARD10Q9Y365 291 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 CLDN16Q9Y5I7 305 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 FLVCR1Q9Y5Y0 555 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SCN2AQ99250 2005 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 TMEM14DPA8MWL7 114 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 C9JQL5 133 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 CLDN4O14493 209 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 TO15178 435 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 FBP1P09467 338 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 VSIG8P0DPA2 414 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 CPT2P23786 658 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 CRABP1P29762 137 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 CAPZBP47756 277 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 CCR4P51679 360 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 GFERP55789 205 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 FAM3AP98173 230 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 GLO1Q04760 184 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 FABP9Q0Z7S8 132 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 BIKQ13323 160 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 RBM39Q14498 530 aaKnown RBP8.46□□□□□ -1.06
HDAC3-205ENST00000469550 TOMM34Q15785 309 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-205ENST00000469550 ACKR1Q16570 336 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 PCK2Q16822 640 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 HYAL4Q2M3T9 481 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 SLC22A6Q4U2R8 563 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 C6orf15Q6UXA7 325 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-205ENST00000469550 TMPPEQ6ZT21 453 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 MED25Q71SY5 747 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 NAA11Q9BSU3 229 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-205ENST00000469550 PRTFDC1Q9NRG1 225 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 SLC5A6Q9Y289 635 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 MEMO1Q9Y316 297 aa8.46□□□□□ -1.06
HDAC3-205ENST00000469550 BOD1L1Q8NFC6 3051 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 FIGNL2A6NMB9 653 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 JTBO76095 146 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 HTR3BO95264 441 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 PMP2P02689 132 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 PRF1P14222 555 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF14P17017 642 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-205ENST00000469550 FPR2P25090 351 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 HAAOP46952 286 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 PPM1FP49593 454 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-205ENST00000469550 MMP16P51512 607 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 KLRB1Q12918 225 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 FAM189A2Q15884 450 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 NNATQ16517 81 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 DEFB109BQ30KR1 87 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 RPL7L1Q6DKI1 246 aaKnown RBP8.45□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF529Q6P280 563 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 C1QL4Q86Z23 238 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 GATSQ8NAP1 163 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 CMBLQ96DG6 245 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 ABHD17AQ96GS6 310 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 TMPRSS5Q9H3S3 457 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 OR2S2Q9NQN1 319 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 RPH3AQ9Y2J0 694 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-205ENST00000469550 EMC9Q9Y3B6 208 aa8.45□□□□□ -1.06
HDAC3-205ENST00000469550 C7orf77A4D0Y5 90 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ADAP1O75689 374 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 UTS2O95399 124 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 CLPSP04118 112 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 SERPINA5P05154 406 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 HKR1P10072 659 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 CTLA4P16410 223 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 RAB5AP20339 215 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 CXCR1P25024 350 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ACKR3P25106 362 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 SUPT4H1P63272 117 aaKnown RBP8.44□□□□□ -1.06
HDAC3-205ENST00000469550 RAB32Q13637 225 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 LHFPL1Q86WI0 220 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms