RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ETFRF1Q6IPR1 90 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 UNQ6494/PRO21346Q6UXR6 183 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 DPY19L2P2Q6ZN68 376 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 TEX43Q6ZNM6 134 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ESPNLQ6ZVH7 1005 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SLC24A5Q71RS6 500 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 Q7L0L9 218 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CATSPERDQ86XM0 798 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 WDFY1Q8IWB7 410 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF595Q8IYB9 648 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF683Q8IZ20 524 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 GBGT1Q8N5D6 347 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF433Q8N7K0 673 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM99Q8N816 258 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 EXD3Q8N9H8 876 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 C17orf47Q8NEP4 570 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR4K1Q8NGD4 311 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR5L1Q8NGL2 311 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 HASPINQ8TF76 798 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 C2orf15Q8WU43 125 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 DNASE2BQ8WZ79 361 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 AQP3Q92482 292 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 FRZBQ92765 325 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MCHR2Q969V1 340 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RPUSD4Q96CM3 377 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RNF125Q96EQ8 232 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ABHD14BQ96IU4 210 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SEC22AQ96IW7 307 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF514Q96K75 400 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 C16orf92Q96LL3 132 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 GNRHR2Q96P88 292 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CABLES2Q9BTV7 478 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SF3B5Q9BWJ5 86 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SCRT1Q9BWW7 348 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 GPR174Q9BXC1 333 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 PARD6GQ9BYG4 376 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MAP1LC3BQ9GZQ8 125 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CST11Q9H112 138 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZBP1Q9H171 429 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR52D1Q9H346 318 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CHODLQ9H9P2 273 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 IL21RQ9HBE5 538 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR2S2Q9NQN1 319 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 C1orf123Q9NWV4 160 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SEMA5BQ9P283 1151 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 FBLN5Q9UBX5 448 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SLC23A2Q9UGH3 650 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF230Q9UIE0 474 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SERTAD3Q9UJW9 196 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF346Q9UL40 294 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ICAM5Q9UMF0 924 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SLC45A2Q9UMX9 530 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MRPS16Q9Y3D3 137 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 B3GALT1Q9Y5Z6 326 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 NUP214P35658 2090 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 KIAA1671Q9BY89 1806 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ADAMTSL1Q8N6G6 1762 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TRBV5-7A0A0A0MS05 114 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 C13orf42A0A1B0GVH6 325 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PRSS38A1L453 326 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 OR2W5A6NFC9 320 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 C9JQL5 133 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SOCS6O14544 535 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 HSD17B6O14756 317 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 RRP8O43159 456 aaKnown RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CNMDO75829 334 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SNAI1O95863 264 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 IFNA1P01562 189 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PRH1P02810 166 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ERCC1P07992 297 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF735P0CB33 412 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ESDP10768 282 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 EN2P19622 333 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CCNOP22674 350 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 IGFBP6P24592 240 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 HOXA11P31270 313 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ARL3P36405 182 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ALDH3B1P43353 468 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 RAB28P51157 221 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 HMGCS2P54868 508 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 SLC37A1P57057 533 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TPPP2P59282 170 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PFN3P60673 137 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TGM3Q08188 693 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 MALLQ13021 153 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 IL15RAQ13261 267 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 PPP1R1AQ13522 171 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ENPP2Q13822 863 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 IHHQ14623 411 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 IL13RA2Q14627 380 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 OR7A5Q15622 319 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ADIPOQQ15848 244 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 UPP1Q16831 310 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 ODF4Q2M2E3 257 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TCTN1Q2MV58 587 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM41BQ5BJD5 291 aa4.3□□□□□ -1.72
SF3B1-207ENST00000468925 CLEC12AQ5QGZ9 265 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms