RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CDH15P55291 814 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 GNG3P63215 75 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 HOXA4Q00056 320 aaPredicted RBP9.27□□□□□ -0.93
MSH5-212ENST00000467319 MED21Q13503 144 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 IRF3Q14653 427 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 ZNF404Q494X3 552 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 CEP78Q5JTW2 689 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 PLCXD3Q63HM9 321 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 TMPRSS11AQ6ZMR5 421 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 ZNF826PQ6ZT77 177 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 PEG10Q86TG7 708 aaKnown RBP9.27□□□□□ -0.93
MSH5-212ENST00000467319 LRRC28Q86X40 367 aaPredicted RBP9.27□□□□□ -0.93
MSH5-212ENST00000467319 RDH10Q8IZV5 341 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 C1orf87Q8N0U7 546 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 GCSAMQ8N6F7 178 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 OR11L1Q8NGX0 322 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 PIGCQ92535 297 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 MSI2Q96DH6 328 aaKnown RBP9.27□□□□□ -0.93
MSH5-212ENST00000467319 ADAT3Q96EY9 351 aaPredicted RBP9.27□□□□□ -0.93
MSH5-212ENST00000467319 CDCA4Q9BXL8 241 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 OR51I2Q9H344 312 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 DUSP21Q9H596 190 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 NARFLQ9H6Q4 476 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 ZNF665Q9H7R5 613 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 PLEKHA1Q9HB21 404 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 C1orf123Q9NWV4 160 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 HHLA2Q9UM44 414 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
MSH5-212ENST00000467319 A6NLC8 198 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 SRRM5B3KS81 715 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 FAM157AC9JC47 383 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 H3BSH0 61 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 OGG1O15527 345 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 NRASP01111 189 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 GRPP07492 148 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 RPSAP08865 295 aaKnown RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 EGR1P18146 543 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 GPM6AP51674 278 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 GTF2A1P52655 376 aaPredicted RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 FAM201AQ5SY85 155 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 DMKNQ6E0U4 476 aaPredicted RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 RPL22L1Q6P5R6 122 aaKnown RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 UTS2BQ765I0 119 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 MUC20Q8N307 709 aaPredicted RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 SPICQ8N5J4 248 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 ZNF676Q8N7Q3 588 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 OR5A2Q8NGI9 324 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 PP6455Q8WZ26 134 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 RAB39BQ96DA2 213 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 SMIM19Q96E16 107 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 PGLYRP3Q96LB9 341 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 CNBD2Q96M20 576 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 TECTBQ96PL2 329 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 GAL3ST1Q99999 423 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 PDCD1LG2Q9BQ51 273 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 TRIM36Q9NQ86 728 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 BABAM2Q9NXR7 383 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 RNF7Q9UBF6 113 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 LSM2Q9Y333 95 aaKnown RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 SIRT4Q9Y6E7 314 aaPredicted RBP9.26□□□□□ -0.93
MSH5-212ENST00000467319 MALRD1Q5VYJ5 2156 aa9.26□□□□□ -0.93
MSH5-212ENST00000467319 TRBV2A0A0J9YWF9 115 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 ISPDA4D126 451 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 A6NIN4 97 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 CEACAM18A8MTB9 384 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 A8MXK9 166 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 LGALS8O00214 317 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 DENRO43583 198 aaKnown RBP9.25□□□□□ -0.93
MSH5-212ENST00000467319 GATBO75879 557 aaKnown RBP9.25□□□□□ -0.93
MSH5-212ENST00000467319 IRF2P14316 349 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 MPZP25189 248 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 CD80P33681 288 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 WNT4P56705 351 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 BDH1Q02338 343 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 DMRTC1Q5HYR2 192 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 TEX36Q5VZQ5 186 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 CYB5R2Q6BCY4 276 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 ASPHD2Q6ICH7 369 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 STX19Q8N4C7 294 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 NANOGP1Q8N7R0 232 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 SCCPDHQ8NBX0 429 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 OR10Z1Q8NGY1 313 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 OR5AK2Q8NH90 309 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 LRRC29Q8WV35 223 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 RPL3LQ92901 407 aaKnown RBP9.25□□□□□ -0.93
MSH5-212ENST00000467319 RNF170Q96K19 258 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 COMMD4Q9H0A8 199 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 METTL17Q9H7H0 456 aaPredicted RBP9.25□□□□□ -0.93
MSH5-212ENST00000467319 TMEM165Q9HC07 324 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 GPR173Q9NS66 373 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 CHCHD3Q9NX63 227 aaKnown RBP9.25□□□□□ -0.93
MSH5-212ENST00000467319 SCN3BQ9NY72 215 aa9.25□□□□□ -0.93
MSH5-212ENST00000467319 PPIAL4EA0A075B759 164 aa9.24□□□□□ -0.93
MSH5-212ENST00000467319 IGKV1-9A0A0C4DH69 117 aa9.24□□□□□ -0.93
MSH5-212ENST00000467319 hCG_1807616A0A1W2PRN6 198 aa9.24□□□□□ -0.93
MSH5-212ENST00000467319 ZNF732B4DXR9 585 aa9.24□□□□□ -0.93
MSH5-212ENST00000467319 PPIAL4DF5H284 164 aa9.24□□□□□ -0.93
MSH5-212ENST00000467319 J3QT63 122 aa9.24□□□□□ -0.93
MSH5-212ENST00000467319 CDIPTO14735 213 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms