RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF878C9JN71 531 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 RAD51DO75771 328 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 MMP7P09237 267 aaPredicted RBP16.18■□□□□ 0.18
CAPN3-209ENST00000466222 RRASP10301 218 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 IGFBP3P17936 291 aaPredicted RBP16.18■□□□□ 0.18
CAPN3-209ENST00000466222 NFYAP23511 347 aaPredicted RBP16.18■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF627Q7L945 461 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 OR6M1Q8NGM8 313 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 OR1K1Q8NGR3 316 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 GPX8Q8TED1 209 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 Q9UFV3 132 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 PROCRQ9UNN8 238 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 TRGV8A0A0C4DH27 118 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 TMEM269A0A1B0GVZ9 245 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 F5H5K5 113 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 GTF2F2P13984 249 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 BMP5P22003 454 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 TAS2R19P59542 299 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 PLA2G7Q13093 441 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 MRPL49Q13405 166 aaKnown RBP16.17■□□□□ 0.18
CAPN3-209ENST00000466222 SFRP5Q5T4F7 317 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 GABRG1Q8N1C3 465 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 CCDC107Q8WV48 283 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 ELMOD3Q96FG2 381 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 WNT5BQ9H1J7 359 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 R4GMQ9 66 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 E9PLN8 166 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 FARS2O95363 451 aaKnown RBP16.17■□□□□ 0.18
CAPN3-209ENST00000466222 ISG15P05161 165 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 VSIG10L2P0DP72 767 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 CD79AP11912 226 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 ACHEP22303 614 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 EFNB2P52799 333 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 RBPJQ06330 500 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 TAF13Q15543 124 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 DEGS2Q6QHC5 323 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF474Q6S9Z5 364 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-209ENST00000466222 IDO2Q6ZQW0 420 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 TMEM229BQ8NBD8 167 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 CPEB3Q8NE35 698 aaKnown RBP16.17■□□□□ 0.18
CAPN3-209ENST00000466222 ASB5Q8WWX0 329 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 BCL2L2Q92843 193 aaPredicted RBP16.17■□□□□ 0.18
CAPN3-209ENST00000466222 SLC25A28Q96A46 364 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 PTX4Q96A99 478 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 OR2H1Q9GZK4 316 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 FAM206AQ9NX38 181 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF319Q9P2F9 582 aa16.17■□□□□ 0.18
CAPN3-209ENST00000466222 FREM1Q5H8C1 2179 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 TMEM272A0A1B0GTI8 110 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 MCRIP1C9JLW8 97 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 SGCEO43556 437 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 HOXD4P09016 255 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-209ENST00000466222 HTR2CP28335 458 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 HSD11B1P28845 292 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 PABPC1L2AQ5JQF8 200 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF704Q6ZNC4 412 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-209ENST00000466222 ABHD12BQ7Z5M8 362 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-209ENST00000466222 ST6GALNAC3Q8NDV1 305 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 OR2AK2Q8NG84 335 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 LRRC20Q8TCA0 184 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 ATG5Q9H1Y0 275 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 MYOZ1Q9NP98 299 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-209ENST00000466222 G6PC2Q9NQR9 355 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 MED9Q9NWA0 146 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 OPN4Q9UHM6 478 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 HHLA2Q9UM44 414 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 TIMM10BQ9Y5J6 103 aa16.16■□□□□ 0.18
CAPN3-209ENST00000466222 SYNGR3O43761 229 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CFDP00746 253 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-209ENST00000466222 LPLP06858 475 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CCL2P13500 99 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CXCL2P19875 107 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CTSSP25774 331 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 HGFACQ04756 655 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 AANATQ16613 207 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 NRN1LQ496H8 165 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 STEAP1BQ6NZ63 245 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CXorf67Q86X51 503 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-209ENST00000466222 NKAIN3Q8N8D7 197 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 FOXRED1Q96CU9 486 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-209ENST00000466222 OSGIN2Q9Y236 505 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 ZFYVE26Q68DK2 2539 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 F5H5P2 479 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 I3L521 148 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 RLN1P04808 185 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CX3CR1P49238 355 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF121P58317 390 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-209ENST00000466222 GMFBP60983 142 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 SEC61A1P61619 476 aaKnown RBP16.15■□□□□ 0.18
CAPN3-209ENST00000466222 NHLRC3Q5JS37 347 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 RFPL4BQ6ZWI9 263 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 SLC25A21Q9BQT8 299 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-209ENST00000466222 OR52A1Q9UKL2 312 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 CACNA1CQ13936 2221 aa16.15■□□□□ 0.18
CAPN3-209ENST00000466222 MED12LQ86YW9 2145 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 B8ZZF3 427 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 B3GALNT1O75752 331 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 CRHP06850 196 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 RAB1AP62820 205 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 STK11Q15831 433 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms