RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 HAAOP46952 286 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 SELENOVP59797 346 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 SKP2Q13309 424 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 ADIRFQ15847 76 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.12
HPS4-208ENST00000464362 RTL6Q6ICC9 239 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 CDC20BQ86Y33 519 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 ADGRG3Q86Y34 549 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 SPICQ8N5J4 248 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 RXFP4Q8TDU9 374 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 PTPMT1Q8WUK0 201 aaPredicted RBP8.09□□□□□ -1.12
HPS4-208ENST00000464362 GNG12Q9UBI6 72 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 BOKQ9UMX3 212 aaPredicted RBP8.09□□□□□ -1.12
HPS4-208ENST00000464362 RLFQ13129 1914 aa8.09□□□□□ -1.12
HPS4-208ENST00000464362 DICER1Q9UPY3 1922 aaKnown RBP8.09□□□□□ -1.12
HPS4-208ENST00000464362 LILRA5A6NI73 299 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 SOX15O60248 233 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 JTBO76095 146 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 ONECUT2O95948 504 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 MLF1P58340 268 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 SPANXN5Q5MJ07 72 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 WIPI1Q5MNZ9 446 aaPredicted RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 Q7L0L9 218 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 ISOC2Q96AB3 205 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 SPACA9Q96E40 222 aaPredicted RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 GABRG3Q99928 467 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 TGIF2Q9GZN2 237 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 AK3Q9UIJ7 227 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 PPP1R3CQ9UQK1 317 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 TP53TG5Q9Y2B4 290 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 R4GN57 208 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 MGAMO43451 1857 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 A0A1W2PPV4 95 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 SCAF4O95104 1147 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 IFNA4P05014 189 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 HIST1H1DP16402 221 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 ADRA2CP18825 462 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 KIR3DL2P43630 455 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 CCL7P80098 99 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 INSM1Q01101 510 aaPredicted RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.08□□□□□ -1.12
HPS4-208ENST00000464362 MOGAT2Q3SYC2 334 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 NECAP1Q8NC96 275 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 ADAD2Q8NCV1 583 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 HLA-CQ95604 372 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 MS4A3Q96HJ5 214 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 MRGPRX4Q96LA9 322 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 SLC39A9Q9NUM3 307 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 RNF150Q9ULK6 438 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 ICAM5Q9UMF0 924 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 MRPS18BQ9Y676 258 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 DIDO1Q9BTC0 2240 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 HMGB3O15347 200 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 GPR137BO60478 399 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 RPL19P84098 196 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 PLXDC2Q6UX71 529 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 HIST2H3AQ71DI3 136 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 NAA40Q86UY6 237 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 TMEM104Q8NE00 496 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 OR5M8Q8NGP6 311 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 MCHR2Q969V1 340 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 THOC3Q96J01 351 aaKnown RBP8.08□□□□□ -1.12
HPS4-208ENST00000464362 CCDC74BQ96LY2 380 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 ZFP64Q9NPA5 681 aa8.08□□□□□ -1.12
HPS4-208ENST00000464362 ZNF814B7Z6K7 855 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 GSTP1P09211 210 aaKnown RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 ZNF266Q14584 549 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 DCAF12Q5T6F0 453 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 RPUSD3Q6P087 351 aaKnown RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 NOXO1Q8NFA2 376 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ADAT3Q96EY9 351 aaPredicted RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 PHF7Q9BWX1 381 aaPredicted RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 OPA3Q9H6K4 179 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 PLEKHA3Q9HB20 300 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 GAB2Q9UQC2 676 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 MPDZO75970 2070 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ZNF587BE7ETH6 402 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ADAM11O75078 769 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 SRFP11831 508 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 NQO2P16083 231 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 PTGFRP43088 359 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ZNF133P52736 654 aaPredicted RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 CLDN15P56746 228 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 TGFBR3Q03167 851 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 FUT7Q11130 342 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 MIDNQ504T8 468 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 TMEM255AQ5JRV8 349 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ZNF468Q5VIY5 522 aaPredicted RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 ZNF774Q6NX45 483 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 OR5AP2Q8NGF4 316 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 OR5M9Q8NGP3 310 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 NANOS1Q8WY41 292 aaKnown RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 UTP23Q9BRU9 249 aaKnown RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 SERTAD4Q9NUC0 356 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ANKUB1A6NFN9 424 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms