RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CLN8Q9UBY8 286 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 B4GALT2O60909 372 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 NXPH2O95156 264 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CXorf1O96002 111 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 FUT3P21217 361 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 LMO2P25791 158 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 EPHA2P29317 976 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 NTHL1P78549 312 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 RAB6CQ53S08 254 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 OR5AU1Q8NGC0 362 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 SCAMP5Q8TAC9 235 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 NEIL2Q969S2 332 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 IMMP2LQ96T52 175 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 IKZF5Q9H5V7 419 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 OBP2BQ9NPH6 170 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 SNX11Q9Y5W9 270 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 KIAA1671Q9BY89 1806 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 TRDCB7Z8K6 153 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 C11orf98E9PRG8 122 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 HIST1H1CP16403 213 aaKnown RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CD22P20273 847 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 HOXA11P31270 313 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 IKZF1Q13422 519 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CDONQ4KMG0 1287 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF66Q6ZN08 573 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 NEUROG1Q92886 237 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 IL22RA2Q969J5 263 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PWWP2AQ96N64 755 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 HSD17B10Q99714 261 aaKnown RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 UQCC1Q9NVA1 299 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 KIAA1549LQ6ZVL6 1849 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 DDNO94850 711 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ABHD17CQ6PCB6 329 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PRSS54Q6PEW0 395 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 C17orf47Q8NEP4 570 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 RPS4Y2Q8TD47 263 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 RHBDD1Q8TEB9 315 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 SECTM1Q8WVN6 248 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 C11orf40Q8WZ69 217 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 LMF1Q96S06 567 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 TP53RKQ96S44 253 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PLXNA4Q9HCM2 1894 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 OTOL1A6NHN0 477 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CYR61O00622 381 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 HOXC4P09017 264 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CD1CP29017 333 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PRDX4Q13162 271 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PRRT3Q5FWE3 981 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 BOD1L2Q8IYS8 172 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 MSLNLQ96KJ4 702 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PRRX2Q99811 253 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CHST8Q9H2A9 424 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PIGLQ9Y2B2 252 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 AGPAT2O15120 278 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CRHP06850 196 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 SMIM18P0DKX4 95 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CA7P43166 264 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 LIPNQ5VXI9 398 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF480Q8WV37 535 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 TEAD3Q99594 435 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM147Q9BVK8 224 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 TRAPPC1Q9Y5R8 145 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 FASNP49327 2511 aaKnown RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 C19orf67A6NJJ6 358 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 COCHO43405 550 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ANKRD55Q3KP44 614 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF383Q8NA42 475 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 WDR77Q9BQA1 342 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 C1RLQ9NZP8 487 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 EMCNQ9ULC0 261 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 DBX1A6NMT0 343 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PCSK6P29122 969 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 VIPR2P41587 438 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 C1orf140Q5VVS0 124 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 NSUN5P2Q63ZY6 315 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 BPIFA4PQ86YQ2 179 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CA13Q8N1Q1 262 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 WBP2Q969T9 261 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 GPR137Q96N19 417 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PTPN18Q99952 460 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 HINT2Q9BX68 163 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 GPR52Q9Y2T5 361 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 COL18A1P39060 1754 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF98A6NK75 572 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF593O00488 134 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 NQO2P16083 231 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CDKN2AP42771 156 aaKnown RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 GALR1P47211 349 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 SULT1A1P50225 295 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 UBE2V2Q15819 145 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 OR2M3Q8NG83 312 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 LPPQ93052 612 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
CSMD3-204ENST00000455883 OVOL2Q9BRP0 275 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 MPTX1A8MV57 137 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 HOXB5P09067 269 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 BEX3Q00994 111 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 LY6G5CQ5SRR4 150 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 BVESQ8NE79 360 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms