RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZFP36P26651 326 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 NCR3LG1Q68D85 454 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 DOK3Q7L591 496 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 CMTM1Q8IZ96 169 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 HS3ST5Q8IZT8 346 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 IQCF1Q8N6M8 205 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF525Q8N782 197 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 LGALS12Q96DT0 336 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 SEC22AQ96IW7 307 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR5B12Q96R08 314 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 WACQ9BTA9 647 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 KAT8Q9H7Z6 458 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 PLEKHA3Q9HB20 300 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRSS50Q9UI38 385 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 HSBP1L1C9JCN9 74 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TSPAN2O60636 221 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 SAP30O75446 220 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ETV4P43268 484 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 RBP2P50120 134 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 SRSF4Q08170 494 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 LRRN1Q6UXK5 716 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 WDYHV1Q96HA8 205 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 IGKV3D-11A0A0A0MRZ8 115 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 UBE2QL1A1L167 161 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 LIPFP07098 398 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF708P17019 499 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 AGAP20933 346 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 NPY4RP50391 375 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM33P57088 247 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 CRMP1Q14194 572 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TRAM1Q15629 374 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 GRK1Q15835 563 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 RHOUQ7L0Q8 258 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR4M1Q8NGD0 313 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR9Q2Q8NGE9 314 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF596Q8TC21 504 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM80Q96HE8 168 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 WFIKKN1Q96NZ8 548 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ERVK13-1Q9NX77 482 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC25A10Q9UBX3 287 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 WDR81Q562E7 1941 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 METTL15A6NJ78 407 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 NOS1APO75052 506 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TRMUO75648 421 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ALDOCP09972 364 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 HSD17B1P14061 328 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 MST1P26927 711 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 HOXA1P49639 335 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TOMM34Q15785 309 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF774Q6NX45 483 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR8H2Q8N162 312 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC22A24Q8N4F4 322 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TAAR6Q96RI8 345 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 MCRIP2Q9BUT9 160 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 OAZ3Q9UMX2 235 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 CHCHD2Q9Y6H1 151 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 MEX3AA1L020 520 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 POM121CA8CG34 1229 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 AHCYL1O43865 530 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF254O75437 659 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 SLC2A10O95528 541 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 AGTR1P30556 359 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 RPP30P78346 268 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 ZNF74Q16587 644 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TGIF2LYQ8IUE0 185 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 IL17DQ8TAD2 202 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 MAFIPQ8WZ33 124 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 C11orf24Q96F05 449 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 MARS2Q96GW9 593 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 REEP6Q96HR9 211 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 DMRTA2Q96SC8 542 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 LOC100509620A0A075B734 347 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 FBXO24O75426 580 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 NRASP01111 189 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 PATE4P0C8F1 98 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 UBCP0CG48 685 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRSS12P56730 875 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 FXYD4P59646 89 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TESK1Q15569 626 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 HIST2H3PS2Q5TEC6 136 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 FAM122CQ6P4D5 195 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 NKAIN4Q8IVV8 208 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 CASTOR1Q8WTX7 329 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TAMM41Q96BW9 452 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 FBXL17Q9UF56 701 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 RHBDD3Q9Y3P4 386 aa4.93□□□□□ -1.62
CDC42BPA-209ENST00000448940 TEX46H3BTG2 121 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 IGKV3-11P04433 115 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 FCER2P06734 321 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PPP5CP53041 499 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 PRKCDQ05655 676 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TP53I3Q53FA7 332 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 CORO6Q6QEF8 472 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 Q6ZPB1 254 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 LURAP1LQ8IV03 231 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 Q8IYB0 196 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 RFLNBQ8N5W9 214 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 OR4A16Q8NH70 328 aa4.92□□□□□ -1.62
CDC42BPA-209ENST00000448940 TRUB1Q8WWH5 349 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms