RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SNRPD2P62316 118 aaKnown RBP15.14■□□□□ 0.01
SMC6-206ENST00000446852 DEFB109BQ30KR1 87 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 NLRC3Q7RTR2 1065 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 C9orf62Q8N4C0 152 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 OR13C8Q8NGS7 320 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 SNAPC3Q92966 411 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 IFT46Q9NQC8 304 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 MGAT4CQ9UBM8 478 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 FAM230AA0A1W2PPH8 454 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 G3V3Q6 166 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 GNG2P59768 71 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 CAMK2BQ13554 666 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 SCGB2B2Q4G0G5 96 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 RNASE10Q5GAN6 216 aaKnown RBP15.14■□□□□ 0.01
SMC6-206ENST00000446852 CLVS2Q5SYC1 327 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 SPSB4Q96A44 273 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 POFUT1Q9H488 388 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 ELL3Q9HB65 397 aaPredicted RBP15.14■□□□□ 0.01
SMC6-206ENST00000446852 HSPB11Q9Y547 144 aa15.14■□□□□ 0.01
SMC6-206ENST00000446852 XRCC2O43543 280 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 HRH1P35367 487 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 MEF2DQ14814 521 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 CNN3Q15417 329 aaKnown RBP15.13■□□□□ 0.01
SMC6-206ENST00000446852 SPICQ8N5J4 248 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 MRGPRFQ96AM1 343 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 S100A13Q99584 98 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 SLC25A21Q9BQT8 299 aaPredicted RBP15.13■□□□□ 0.01
SMC6-206ENST00000446852 SCP2D1Q9UJQ7 156 aa15.13■□□□□ 0.01
SMC6-206ENST00000446852 TMEM82A0PJX8 343 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 IL18BPO95998 194 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 NRASP01111 189 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 IGHG3P01860 377 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 CD79AP11912 226 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 CCNOP22674 350 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 UBE2MP61081 183 aaKnown RBP15.12■□□□□ 0.01
SMC6-206ENST00000446852 FAM189A2Q15884 450 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 MUC20Q8N307 709 aaPredicted RBP15.12■□□□□ 0.01
SMC6-206ENST00000446852 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 RANBP3Q9H6Z4 567 aaPredicted RBP15.12■□□□□ 0.01
SMC6-206ENST00000446852 SLC2A8Q9NY64 477 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 ANAPC10Q9UM13 185 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 MGAT4AQ9UM21 535 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 C5orf49A4QMS7 147 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 SPRY1O43609 319 aaPredicted RBP15.12■□□□□ 0.01
SMC6-206ENST00000446852 ANGPTL7O43827 346 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 GSTT2P0CG29 244 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 TMEM225BP0DP42 221 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 RAB1AP62820 205 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 ATPAF1Q5TC12 328 aaPredicted RBP15.12■□□□□ 0.01
SMC6-206ENST00000446852 CHIAQ9BZP6 476 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 PIPOXQ9P0Z9 390 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 ZNF175Q9Y473 711 aa15.12■□□□□ 0.01
SMC6-206ENST00000446852 DISC1C4P0D8 188 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 PLATP00750 562 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 PRKACBP22694 351 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 CXADRP78310 365 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 C2orf68Q2NKX9 166 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 STEAP2Q8NFT2 490 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 OR2T35Q8NGX2 323 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 GRPEL2Q8TAA5 225 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 LRFN3Q9BTN0 628 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 MGAQ8IWI9 3026 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 COX5BP10606 129 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 MPZP25189 248 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 BLVRBP30043 206 aaPredicted RBP15.11■□□□□ 0.01
SMC6-206ENST00000446852 RBP2P50120 134 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 PNLIPRP3Q17RR3 467 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 HIKESHIQ53FT3 197 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 TMED4Q7Z7H5 227 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 ZNF431Q8TF32 576 aaPredicted RBP15.11■□□□□ 0.01
SMC6-206ENST00000446852 WDR89Q96FK6 387 aaPredicted RBP15.11■□□□□ 0.01
SMC6-206ENST00000446852 PRRT1Q99946 306 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 ALX4Q9H161 411 aaPredicted RBP15.11■□□□□ 0.01
SMC6-206ENST00000446852 SLA2Q9H6Q3 261 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMC6-206ENST00000446852 KCNMB2Q9Y691 235 aa15.11■□□□□ 0.01
SMC6-206ENST00000446852 DSPP15924 2871 aaKnown RBP15.11■□□□□ 0.01
SMC6-206ENST00000446852 TRAV17A0A0B4J275 112 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 ZNF891A8MT65 544 aaPredicted RBP15.1■□□□□ 0.01
SMC6-206ENST00000446852 NAT1P18440 290 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 RTP5Q14D33 572 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 C4orf46Q504U0 113 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 FBXW9Q5XUX1 488 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 C17orf107Q6ZR85 190 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 FBXW5Q969U6 566 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 BORCS8Q96FH0 119 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 Q96M66 194 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 PECRQ9BY49 303 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 VSIG4Q9Y279 399 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 PLEKHA6Q9Y2H5 1048 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 ZNF816-ZNF321PA0A0X1KG74 233 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 UBE2QL1A1L167 161 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 PMP2P02689 132 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 CPT2P23786 658 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 DNASE1P24855 282 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 GK2Q14410 553 aaPredicted RBP15.1■□□□□ 0.01
SMC6-206ENST00000446852 MICBQ29980 383 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 LHFPL2Q6ZUX7 228 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 SLC7A5P1Q8MH63 180 aa15.1■□□□□ 0.01
SMC6-206ENST00000446852 OR1K1Q8NGR3 316 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms