RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
VPS50-206ENST00000443443 KIF24Q5T7B8 1368 aa3.61□□□□□ -1.83
VPS50-206ENST00000443443 FRMPD3Q5JV73 1810 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 A0A1W2PNU3 283 aaPredicted RBP3.6□□□□□ -1.83
VPS50-206ENST00000443443 SRRM5B3KS81 715 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 F5H5K5 113 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 K7EMT4 169 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 GABRPO00591 440 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 SUPT3HO75486 399 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 H2AFZP0C0S5 128 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 RBMY1CP0DJD4 496 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 GTF2F2P13984 249 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 GABRG2P18507 467 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 ALOX5APP20292 161 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 USF1P22415 310 aaPredicted RBP3.6□□□□□ -1.83
VPS50-206ENST00000443443 GALR1P47211 349 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 PPOXP50336 477 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 BIDP55957 195 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 ZNF121P58317 390 aaPredicted RBP3.6□□□□□ -1.83
VPS50-206ENST00000443443 ZNF92Q03936 586 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 ZNF726P1Q15940 193 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 CLEC12BQ2HXU8 276 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 NSUN5P1Q3KNT7 163 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 CEACAM21Q3KPI0 293 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 TEX30Q5JUR7 227 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 EPGNQ6UW88 154 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
VPS50-206ENST00000443443 DPPA2Q7Z7J5 298 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 SLC25A42Q86VD7 318 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 CBLN2Q8IUK8 224 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 DAW1Q8N136 415 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 GPD1LQ8N335 351 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 PNKDQ8N490 385 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 OR10W1Q8NGF6 305 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 OR51Q1Q8NH59 317 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 COQ8AQ8NI60 647 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 STOML3Q8TAV4 291 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 RNF138Q8WVD3 245 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 KCTD4Q8WVF5 259 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 BORCS5Q969J3 196 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 DDIT4LQ96D03 193 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 PIK3IP1Q96FE7 263 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 FAM218AQ96MZ4 157 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 OR2V2Q96R30 315 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 PECRQ9BY49 303 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 LIME1Q9H400 295 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 ZNF430Q9H8G1 570 aaPredicted RBP3.6□□□□□ -1.83
VPS50-206ENST00000443443 KCNJ16Q9NPI9 418 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 THYN1Q9P016 225 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 VPS29Q9UBQ0 182 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 CTSZQ9UBR2 303 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 CD84Q9UIB8 345 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 KLHL21Q9UJP4 597 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 SLC7A11Q9UPY5 501 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 TP53TG1Q9Y2A0 90 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 ALG5Q9Y673 324 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 PRRC2AP48634 2157 aaKnown RBP3.6□□□□□ -1.83
VPS50-206ENST00000443443 NUP155O75694 1391 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 MSH6P52701 1360 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 HCFC1P51610 2035 aa3.6□□□□□ -1.83
VPS50-206ENST00000443443 IGHV2OR16-5A0A0B4J2B6 119 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 TRBV5-4A0A0C4DH59 114 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 SMIM9A6NGZ8 99 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 NPIPB9F8W1W9 429 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 TAAR5O14804 337 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 FAM189A1O60320 539 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 DPM1O60762 260 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 SOX14O95416 240 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 TTC4O95801 387 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 CD74P04233 296 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ZDHHC11BP0C7U3 371 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 CRABP1P29762 137 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 PYCR1P32322 319 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 GPX4P36969 197 aaPredicted RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 CEACAM6P40199 344 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ERFP50548 548 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 RORCP51449 518 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 RIDAP52758 137 aaKnown RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 RAB25P57735 213 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 BTN3A2P78410 334 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 FLI1Q01543 452 aaPredicted RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 SKP2Q13309 424 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 KIAA0141Q14154 515 aaPredicted RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 HIST3H3Q16695 136 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 MUC21Q5SSG8 566 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 TMEM42Q69YG0 159 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 OR2T5Q6IEZ7 315 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 SLC36A1Q7Z2H8 476 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 THOC6Q86W42 341 aaKnown RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 PHF13Q86YI8 300 aaPredicted RBP3.59□□□□□ -1.83
VPS50-206ENST00000443443 SKA3Q8IX90 412 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 CBR4Q8N4T8 237 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ARRDC1Q8N5I2 433 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 OR10R2Q8NGX6 335 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 OR2T29Q8NH02 315 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 OR10J5Q8NHC4 309 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 ZFAND1Q8TCF1 268 aa3.59□□□□□ -1.83
VPS50-206ENST00000443443 HAVCR2Q8TDQ0 301 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms