RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ALX4Q9H161 411 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPL22Q9NWU5 206 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 GNG8Q9UK08 70 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 FAM171A2A8MVW0 826 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 H7C1C5 153 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZP3P21754 424 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 GFRA1P56159 465 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 LCN6P62502 163 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 QRFPP83859 136 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ROM1Q03395 351 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 EMC4Q5J8M3 183 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 LIPNQ5VXI9 398 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF324BQ6AW86 544 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 SFRP4Q6FHJ7 346 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 COMMD7Q86VX2 200 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 DMRTC2Q8IXT2 367 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 TAAR8Q969N4 342 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 STARD4Q96DR4 205 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPL48Q96GC5 212 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF385AQ96PM9 386 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 PLK3Q9H4B4 646 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 IGLV1-36A0A0B4J1U3 117 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 GGT3PA6NGU5 568 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 A6NNC1 897 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 SMAD9O15198 467 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 PNPP00491 289 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 CD8AP01732 235 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 EDNRAP25101 427 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 CRABP1P29762 137 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 KIR2DL2P43627 348 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 EGR3Q06889 387 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 TMEM81Q6P7N7 255 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 Q6ZT83 130 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 PIP4P2Q8N4L2 257 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF511Q8NB15 262 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR52B4Q8NGK2 314 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR2G2Q8NGZ5 317 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 SUN5Q8TC36 379 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 GPX8Q8TED1 209 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 CXorf58Q96LI9 332 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 LINC00052Q96N35 136 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 WDR76Q9H967 626 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 NOX3Q9HBY0 568 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPL15Q9P015 296 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 TLN2Q9Y4G6 2542 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ARPC1BO15143 372 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 TOXO94900 526 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 CD74P04233 296 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ANXA2P07355 339 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 CD14P08571 375 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OPCMLQ14982 345 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 MPPED2Q15777 294 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ACKR1Q16570 336 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF660Q6AZW8 331 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF529Q6P280 563 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ARMC10Q8N2F6 343 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 DNAAF1Q8NEP3 725 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR52H1Q8NGJ2 320 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR5L1Q8NGL2 311 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR2T35Q8NGX2 323 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR6N2Q8NGY6 317 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 C4orf45Q96LM5 186 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 CHODLQ9H9P2 273 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 OBP2BQ9NPH6 170 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 VSX1Q9NZR4 365 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 UBQLN2Q9UHD9 624 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF222Q9UK12 451 aa6.43□□□□□ -1.38
CDC42BPA-208ENST00000442054 MYO9AB2RTY4 2548 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR5H1A6NKK0 313 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RGS11O94810 467 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FSTP19883 344 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PTGDSP41222 190 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ALKBH6Q3KRA9 238 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CRIP3Q6Q6R5 217 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPL21Q7Z2W9 205 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 SERPINA12Q8IW75 414 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 NAXEQ8NCW5 288 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR4C16Q8NGL9 310 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 LHFPL5Q8TAF8 219 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PCNPQ8WW12 178 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC25A44Q96H78 314 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 WDR13Q9H1Z4 485 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR10A4Q9H209 315 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 RNF122Q9H9V4 155 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PROK2Q9HC23 129 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 GP6Q9HCN6 339 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC17A5Q9NRA2 495 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CFAP46Q8IYW2 2715 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 FREM2Q5SZK8 3169 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 PRRC2AP48634 2157 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 LOC102725191A0A1B0GVB3 256 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC22A23A1A5C7 686 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 AQP7P3A6NL99 342 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CDC14BO60729 498 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CYTIPO60759 359 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 GPANK1O95872 356 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 HRGP04196 525 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 LPLP06858 475 aa6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 CEACAM8P31997 349 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-208ENST00000442054 ARR3P36575 388 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms