RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 LHX4Q969G2 390 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 UTP4Q969X6 686 aaKnown RBP8.5□□□□□ -1.05
CPNE1-214ENST00000435747 RCC1LQ96I51 464 aaKnown RBP8.5□□□□□ -1.05
CPNE1-214ENST00000435747 LRGUKQ96M69 825 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 FGF23Q9GZV9 251 aaPredicted RBP8.5□□□□□ -1.05
CPNE1-214ENST00000435747 TLNRD1Q9H1K6 362 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 SLC25A19Q9HC21 320 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 SMURF1Q9HCE7 757 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 DNAJB9Q9UBS3 223 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 CLN8Q9UBY8 286 aa8.5□□□□□ -1.05
CPNE1-214ENST00000435747 NOP16Q9Y3C1 178 aaKnown RBP8.5□□□□□ -1.05
CPNE1-214ENST00000435747 GGT3PA6NGU5 568 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 PRR32B1ATL7 298 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 ZNF879B4DU55 563 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 H3BN98 237 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 DUS4LO95620 317 aaKnown RBP8.49□□□□□ -1.05
CPNE1-214ENST00000435747 FBP1P09467 338 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 CD28P10747 220 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 AMY2BP19961 511 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 ALOX5APP20292 161 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 ACKR3P25106 362 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 NPY4RP50391 375 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 EFNB1P98172 346 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 FLOT2Q14254 428 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 DNAL1Q4LDG9 190 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 FAM76BQ5HYJ3 339 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-214ENST00000435747 FAHD1Q6P587 224 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 SHFQ7M4L6 423 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 OR1M1Q8NGA1 313 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 OR52H1Q8NGJ2 320 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 OR11L1Q8NGX0 322 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 OR5R1Q8NH85 324 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 REEP6Q96HR9 211 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 LYZL4Q96KX0 146 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 CADM1Q9BY67 442 aaKnown RBP8.49□□□□□ -1.05
CPNE1-214ENST00000435747 C1orf123Q9NWV4 160 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 ZNRD1Q9P1U0 126 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 KAAG1Q9UBP8 84 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
CPNE1-214ENST00000435747 ALMS1Q8TCU4 4167 aa8.49□□□□□ -1.05
CPNE1-214ENST00000435747 A0A1B0GW55 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 CCDC182A6NF36 153 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 OOEPA6NGQ2 149 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 PRR23D1E9PI22 279 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-214ENST00000435747 GYG2O15488 501 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 IGLV3-1P01715 115 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 LYNP07948 512 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L2P0CJ85 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L3P0CJ86 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L4P0CJ87 422 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L5P0CJ88 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L6P0CJ89 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L7P0CJ90 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 PRR23D2P0DMB1 279 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ANXA8P13928 327 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 GSK3AP49840 483 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
CPNE1-214ENST00000435747 CSNK2BP67870 215 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ELF3P78545 371 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-214ENST00000435747 CBX1P83916 185 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 BNIP1Q12981 228 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 TAF13Q15543 124 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 SLC35D3Q5M8T2 416 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 METTL11BQ5VVY1 283 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 TMEM236Q5W0B7 351 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ZFAND6Q6FIF0 208 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4L9Q6RFH8 374 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-214ENST00000435747 WDR82Q6UXN9 313 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ADAMTSL5Q6ZMM2 481 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 FAM57BQ71RH2 274 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 CPOQ8IVL8 374 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ZNF454Q8N9F8 522 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 BCAS4Q8TDM0 211 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 HPSE2Q8WWQ2 592 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 NRBF2Q96F24 287 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 WDFY2Q96P53 400 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 CITED2Q99967 270 aaPredicted RBP8.48□□□□□ -1.05
CPNE1-214ENST00000435747 SIRPDQ9H106 197 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 OR51V1Q9H2C8 321 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 RNPEPL1Q9HAU8 725 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DNAJC27Q9NZQ0 273 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 DUX4Q9UBX2 424 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 RHBDD3Q9Y3P4 386 aa8.48□□□□□ -1.05
CPNE1-214ENST00000435747 ANKRD30BLA7E2S9 258 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 GSC2O15499 205 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 TBX1O43435 398 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 NDUFA2O43678 99 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 ANGPTL7O43827 346 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 DNAJC8O75937 253 aaPredicted RBP8.47□□□□□ -1.05
CPNE1-214ENST00000435747 CST4P01036 141 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 APOC1P02654 83 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 HMGN1P05114 100 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 ANXA2P07355 339 aaKnown RBP8.47□□□□□ -1.05
CPNE1-214ENST00000435747 GRPP07492 148 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 PF4V1P10720 104 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 IRF2P14316 349 aa8.47□□□□□ -1.05
CPNE1-214ENST00000435747 PAICSP22234 425 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms