RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 OPN4Q9UHM6 478 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF724A8MTY0 619 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 CDRT15L2A8MXV6 281 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 RPL36A-HNRNPH2H7BZ11 118 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 SLC22A5O76082 557 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 PRKACBP22694 351 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 BLVRBP30043 206 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 DHODHQ02127 395 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF92Q03936 586 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 MICBQ29980 383 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 CLVS2Q5SYC1 327 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 DCAF12L2Q5VW00 463 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 MCEMP1Q8IX19 187 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZDHHC22Q8N966 263 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 CPEB3Q8NE35 698 aaKnown RBP12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 MRGPRFQ96AM1 343 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 APH1AQ96BI3 265 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 CPNE2Q96FN4 548 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 TM2D1Q9BX74 207 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 PECRQ9BY49 303 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 DEFB127Q9H1M4 99 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 LDAHQ9H6V9 325 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 HEXA-AS1Q9H8Q6 139 aa12.18□□□□□ -0.46
APOBEC3D-202ENST00000427494 hCG_38984A0A1B0GV85 526 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 FOXI3A8MTJ6 420 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 CDK2AP1O14519 115 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 ACTL6AO96019 429 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 PLATP00750 562 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 EDN3P14138 238 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 NAT1P18440 290 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 CPT2P23786 658 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 CBX5P45973 191 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 FAM3AP98173 230 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 DHRS2Q13268 280 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 RNPS1Q15287 305 aaKnown RBP12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 MPPED2Q15777 294 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 ACTBL2Q562R1 376 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 TEX261Q6UWH6 196 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 RNF122Q9H9V4 155 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 ACKR4Q9NPB9 350 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 B3GNT2Q9NY97 397 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 U3KQ87 197 aa12.17□□□□□ -0.46
APOBEC3D-202ENST00000427494 IGKV1-27A0A075B6S5 117 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 OR2AT4A6NND4 320 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 XRCC2O43543 280 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 SPRY1O43609 319 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 NRASP01111 189 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 STK11Q15831 433 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 LHFPL2Q6ZUX7 228 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 FBXW5Q969U6 566 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 BORCS8Q96FH0 119 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 PLSCR5A0PG75 271 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 ANGPTL7O43827 346 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 HTR3BO95264 441 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 HLA-HP01893 362 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 AMY2BP19961 511 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 GABRR1P24046 479 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 CD34P28906 385 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 SRSF6Q13247 344 aaKnown RBP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 RSU1Q15404 277 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 GRK1Q15835 563 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 C6orf183Q5T699 404 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 TMEM42Q69YG0 159 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 TMPRSS7Q7RTY8 843 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 NUFIP2Q7Z417 695 aaKnown RBP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 TMEM178AQ8NBL3 297 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 TMPRSS13Q9BYE2 586 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 PRDM14Q9GZV8 571 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 NOP16Q9Y3C1 178 aaKnown RBP12.16□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF407Q9C0G0 2248 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 ERVH48-1M5A8F1 160 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 NKX2-8O15522 239 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 RGS11O94810 467 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 MPC2O95563 127 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 CXCL2P19875 107 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 RBP2P50120 134 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 OR8B8Q15620 311 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 MOB3CQ70IA8 216 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 LYG2Q86SG7 212 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms