RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 NMNAT1Q9HAN9 279 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CACYBPQ9HB71 228 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 POPDC2Q9HBU9 364 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 NT5MQ9NPB1 228 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 IL26Q9NPH9 171 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CTPS2Q9NRF8 586 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PDP1Q9P0J1 537 aaPredicted RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PHF11Q9UIL8 331 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TPRKBQ9Y3C4 175 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CLCA3PQ9Y6N3 262 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 STRCP1A6NGW2 1772 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 CHD3Q12873 2000 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TSC2P49815 1807 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PIKFYVEQ9Y2I7 2098 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF106Q9H2Y7 1883 aaKnown RBP2.35□□□□□ -2.03
LINC01040-201ENST00000425048 A0A0G2JMZ2 1700 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LRRC37A2A6NM11 1700 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LRRC37AA6NMS7 1700 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 NUP205Q92621 2012 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 A0A0A6YYC8 382 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SLC5A10A0PJK1 596 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM218A2RU14 115 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 DISC1C4P0D8 188 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MCRIP1C9JLW8 97 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TSTD3H0UI37 97 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 I3L1I5 382 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SGK494L7N484 410 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 DDX39AO00148 427 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MRASO14807 208 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CHADO15335 359 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LYRM1O43325 122 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SEC22BO75396 215 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 WBP4O75554 376 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 AQP8O94778 261 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 OR4F21O95013 312 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SIX6O95475 246 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LGI1O95970 557 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 AK1P00568 194 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SEMG1P04279 462 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 IGKV5-2P06315 115 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ANXA5P08758 320 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 NBEAP1P0C6P0 100 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 METTL15P1P0C7V9 234 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 NQO2P16083 231 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ABOP16442 354 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TBPP20226 339 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 NT5EP21589 574 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 STOMP27105 288 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LCN1P31025 176 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 BTCP35070 178 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 RPL22P35268 128 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CDKN2CP42773 168 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MAGEB1P43366 347 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SLC11A1P49279 550 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PPT1P50897 306 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 RORCP51449 518 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PRRX1P54821 245 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 DNAJB13P59910 316 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 RAP1BP61224 184 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MAXP61244 160 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 STXBP1P61764 594 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 HTD2P86397 168 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 CDK6Q00534 326 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF85Q03923 595 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 YWHAHQ04917 246 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TCP10Q12799 353 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PDZK1IP1Q13113 114 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 BIKQ13323 160 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MADCAM1Q13477 382 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 MAD2L1BPQ15013 274 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PEA15Q15121 130 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SF3A2Q15428 464 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LY6EQ16553 131 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 C10orf120Q5SQS8 335 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 NCMAPQ5T1S8 102 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LGSNQ5TDP6 509 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LIPKQ5VXJ0 399 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF470Q6ECI4 717 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 OR4F3Q6IEY1 312 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 RPUSD3Q6P087 351 aaKnown RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ULK3Q6PHR2 472 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 UQCC3Q6UW78 93 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 HSDL2Q6YN16 418 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF620Q6ZNG0 422 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 AHSA2Q719I0 299 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ABHD13Q7L211 337 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 IFNEQ86WN2 208 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 LRRC28Q86X40 367 aaPredicted RBP2.34□□□□□ -2.03
LINC01040-201ENST00000425048 ANGPTL5Q86XS5 388 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 PDZD9Q8IXQ8 264 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 STK40Q8N2I9 435 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 SVBPQ8N300 66 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 FTMTQ8N4E7 242 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM104Q8NE00 496 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 OR4F6Q8NGB9 312 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 OR8J3Q8NGG0 315 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 OR2V1Q8NHB1 315 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 HAS2Q92819 552 aa2.34□□□□□ -2.03
LINC01040-201ENST00000425048 S100PBPQ96BU1 408 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms