RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 C11orf88Q6PI97 169 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 CDH24Q86UP0 819 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 TMEM229BQ8NBD8 167 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 ADAD2Q8NCV1 583 aaKnown RBP7.66□□□□□ -1.18
SNCA-206ENST00000420646 BHLHE23Q8NDY6 225 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 SEC22AQ96IW7 307 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 CITED4Q96RK1 184 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 LDAHQ9H6V9 325 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 IFT46Q9NQC8 304 aa7.66□□□□□ -1.18
SNCA-206ENST00000420646 FAM221AA4D161 298 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 IGLV3-1P01715 115 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 HPNP05981 417 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 ERCC1P07992 297 aaPredicted RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 OR4E1P0C645 316 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 ZNF708P17019 499 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 AKR1C4P17516 323 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 RAB6AP20340 208 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 BLVRBP30043 206 aaPredicted RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 AP2S1P53680 142 aaPredicted RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 GNG2P59768 71 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 ECH1Q13011 328 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 EIF3IQ13347 325 aaKnown RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 ARFRP1Q13795 201 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 TAF9Q16594 264 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 LRRC37A5PQ49AS3 106 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SEMA6DQ8NFY4 1073 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 CPT1CQ8TCG5 803 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SSC4DQ8WTU2 575 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 CASTOR1Q8WTX7 329 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 FBXW5Q969U6 566 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 OR10A2Q9H208 303 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SLCO5A1Q9H2Y9 848 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 RANBP3Q9H6Z4 567 aaPredicted RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 PCDHGA1Q9Y5H4 931 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 FAM208BQ5VWN6 2430 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 A0A0U1RQV5 110 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 CD79AP11912 226 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 EDN3P14138 238 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 NPY4RP50391 375 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SNU13P55769 128 aaKnown RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 RAB35Q15286 201 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 MICBQ29980 383 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SLC38A6Q8IZM9 456 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 GCNT2Q8N0V5 402 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 KCNG3Q8TAE7 436 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 INTS12Q96CB8 462 aaKnown RBP7.65□□□□□ -1.18
SNCA-206ENST00000420646 CHST5Q9GZS9 411 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 CST11Q9H112 138 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SLA2Q9H6Q3 261 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 HEXA-AS1Q9H8Q6 139 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 B3GNT2Q9NY97 397 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 B4GALT7Q9UBV7 327 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 PRSS50Q9UI38 385 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 SCP2D1Q9UJQ7 156 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 TIMM10BQ9Y5J6 103 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 V9GYS6 101 aa7.65□□□□□ -1.18
SNCA-206ENST00000420646 IGKV1D-8A0A087WSZ0 117 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 C5orf49A4QMS7 147 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 ARPC5O15511 151 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 PRAF2O60831 178 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 RGS11O94810 467 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 NGFP01138 241 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 CST2P09228 141 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 HIST1H1DP16402 221 aaKnown RBP7.65□□□□□ -1.19
SNCA-206ENST00000420646 CXCL2P19875 107 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 RRADP55042 308 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 GRK1Q15835 563 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 HIKESHIQ53FT3 197 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 C5orf24Q7Z6I8 188 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 FDCSPQ8NFU4 85 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 OR2AK2Q8NG84 335 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 OR4K15Q8NH41 348 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 MARCH1Q8TCQ1 289 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 PIGCQ92535 297 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 GPN1Q9HCN4 374 aaPredicted RBP7.65□□□□□ -1.19
SNCA-206ENST00000420646 ABI3Q9P2A4 366 aa7.65□□□□□ -1.19
SNCA-206ENST00000420646 IGHV3-64DA0A0J9YX35 117 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 OR6C6A6NF89 314 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 DNPH1O43598 174 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 SLC22A5O76082 557 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 HLA-AP01891 365 aaKnown RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 MMP7P09237 267 aaPredicted RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 VAMP1P23763 118 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 RBMXP38159 391 aaKnown RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 DHRS2Q13268 280 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 RAB12Q6IQ22 244 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 JMJD6Q6NYC1 403 aaPredicted RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 MDS2Q8NDY4 140 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 PTX4Q96A99 478 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 ELMOD3Q96FG2 381 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 S100A13Q99584 98 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 GON7Q9BXV9 100 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 ZNF552Q9H707 407 aaPredicted RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 SCPEP1Q9HB40 452 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 SPRR3Q9UBC9 169 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 NPTNQ9Y639 398 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 FXYD6-FXYD2A0A087WZ82 144 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 FAM25EA8MYX2 175 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 FAM3AP98173 230 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 SCRN3Q0VDG4 424 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms