RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TMEM95Q3KNT9 176 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SLC35D3Q5M8T2 416 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 CCDC121Q6ZUS5 278 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF771Q7L3S4 317 aaPredicted RBP5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SHFQ7M4L6 423 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 PRSS45Q7RTY3 260 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 AMIGO2Q86SJ2 522 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 PEG10Q86TG7 708 aaKnown RBP5.81□□□□□ -1.48
HMGN1-205ENST00000419378 GLCCI1Q86VQ1 547 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 OR13G1Q8NGZ3 307 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 OTOSQ8NHW6 89 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SPRYD4Q8WW59 207 aaPredicted RBP5.81□□□□□ -1.48
HMGN1-205ENST00000419378 RAB39BQ96DA2 213 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 SIGLEC11Q96RL6 698 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 GAL3ST1Q99999 423 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 TOR3AQ9H497 397 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 KRT84Q9NSB2 600 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM100Q9NV29 134 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 TVP23BQ9NYZ1 205 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 PPP1R3CQ9UQK1 317 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 KLHDC2Q9Y2U9 406 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 N6AMT1Q9Y5N5 214 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 NPTNQ9Y639 398 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 DYSFO75923 2080 aa5.81□□□□□ -1.48
HMGN1-205ENST00000419378 CCDC182A6NF36 153 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 GGT3PA6NGU5 568 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 CD300LBA8K4G0 201 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM178BH3BS89 294 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 M0R129 80 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 PSMD9O00233 223 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 XRCC2O43543 280 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 PRKYO43930 277 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 IFNA2P01563 188 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 HLA-DPB1P04440 258 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 LYNP07948 512 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 MRPL3P09001 348 aaKnown RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 SRD5A1P18405 259 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 EPHA2P29317 976 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 SRP9P49458 86 aaKnown RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 RAD23AP54725 363 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 KRTAP10-2P60368 255 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 ACTR3P61158 418 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 APOFQ13790 326 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 KPNB1Q14974 876 aaKnown RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 ZMYND11Q15326 602 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 TIGD6Q17RP2 521 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 LCN1P1Q5VSP4 162 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 SLX4IPQ5VYV7 408 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 C12orf73Q69YU5 71 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 KDM4DQ6B0I6 523 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 Q6YL49 198 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 MOGAT3Q86VF5 341 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 SPICQ8N5J4 248 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 OR56B2PQ8NGI1 322 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 OR51F2Q8NH61 342 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF420Q8TAQ5 688 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 THEM6Q8WUY1 208 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 PYDC1Q8WXC3 89 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 LINC00476Q8WZB0 136 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 TRIM63Q969Q1 353 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM186Q96B77 213 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 CENPNQ96H22 339 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 CIB1Q99828 191 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 ADAT1Q9BUB4 502 aaKnown RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 DPCDQ9BVM2 203 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 PRRG3Q9BZD7 231 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 SEMA6AQ9H2E6 1030 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 HIF1ANQ9NWT6 349 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 UBAP1Q9NZ09 502 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 DNAJC27Q9NZQ0 273 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 MRPL15Q9P015 296 aaKnown RBP5.8□□□□□ -1.48
HMGN1-205ENST00000419378 STEAP1Q9UHE8 339 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 ENOPH1Q9UHY7 261 aa5.8□□□□□ -1.48
HMGN1-205ENST00000419378 hCG_38984A0A1B0GV85 526 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 SAC3D1A6NKF1 404 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 LRRC30A6NM36 301 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 H3BNX3 289 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 IFNL4K9M1U5 179 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 EBAG9O00559 213 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 PLPP2O43688 288 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 NXPH3O95157 252 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 CYB5R3P00387 301 aaPredicted RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 APOC1P02654 83 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 H2BFMP0C1H6 154 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 SBK2P0C263 348 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 ALOX5APP20292 161 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 CA6P23280 308 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 MDH2P40926 338 aaKnown RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 PMELP40967 661 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 CD200P41217 278 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF121P58317 390 aaPredicted RBP5.79□□□□□ -1.48
HMGN1-205ENST00000419378 EFNB1P98172 346 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 MAB21L1Q13394 359 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 OR8G1Q15617 311 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 ZNF181Q2M3W8 571 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 TMEM155Q4W5P6 130 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 AADACL4Q5VUY2 407 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 PRAMEF6Q5VXH4 476 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 NXNL2Q5VZ03 156 aa5.79□□□□□ -1.48
HMGN1-205ENST00000419378 LRRN1Q6UXK5 716 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms