RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ZFPL1O95159 310 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 LALBAP00709 142 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 NRASP01111 189 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 MYL12AP19105 171 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 C21orf33P30042 268 aaPredicted RBP15.63■□□□□ 0.09
PTCD3-204ENST00000418628 SLC35A2P78381 396 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 HOXA4Q00056 320 aaPredicted RBP15.63■□□□□ 0.09
PTCD3-204ENST00000418628 CDK5R1Q15078 307 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 CCDC58Q4VC31 144 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 CEP78Q5JTW2 689 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 FAM201AQ5SY85 155 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 CYB5R2Q6BCY4 276 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 MUC20Q8N307 709 aaPredicted RBP15.63■□□□□ 0.09
PTCD3-204ENST00000418628 KLHL36Q8N4N3 616 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 SPICQ8N5J4 248 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 OR5A2Q8NGI9 324 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 RAB39BQ96DA2 213 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 TMEM165Q9HC07 324 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 C1orf123Q9NWV4 160 aa15.63■□□□□ 0.09
PTCD3-204ENST00000418628 TMEM212A6NML5 194 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 SRRM5B3KS81 715 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 GRPP07492 148 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 CCDC159P0C7I6 412 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 ZNF12P17014 697 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 EGR1P18146 543 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 GPM6AP51674 278 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 GTF2A1P52655 376 aaPredicted RBP15.62■□□□□ 0.09
PTCD3-204ENST00000418628 GBX2P52951 348 aaPredicted RBP15.62■□□□□ 0.09
PTCD3-204ENST00000418628 GNG3P63215 75 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 TMPRSS11AQ6ZMR5 421 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 Q71RC1 249 aaPredicted RBP15.62■□□□□ 0.09
PTCD3-204ENST00000418628 LINC01356Q8N9X3 169 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 SCCPDHQ8NBX0 429 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 OR51A4Q8NGJ6 313 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 OR10Z1Q8NGY1 313 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 RGP1Q92546 391 aaPredicted RBP15.62■□□□□ 0.09
PTCD3-204ENST00000418628 ADAT3Q96EY9 351 aaPredicted RBP15.62■□□□□ 0.09
PTCD3-204ENST00000418628 RNF170Q96K19 258 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 GAL3ST1Q99999 423 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 OR51I2Q9H344 312 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 PATZ1Q9HBE1 687 aaKnown RBP15.62■□□□□ 0.09
PTCD3-204ENST00000418628 TMEM160Q9NX00 188 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 HHLA2Q9UM44 414 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 MXRA5Q9NR99 2828 aa15.62■□□□□ 0.09
PTCD3-204ENST00000418628 PPIAL4EA0A075B759 164 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PQLC2LA1A4F0 135 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 ISPDA4D126 451 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 ANKRD61A6NGH8 418 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 A6NLC8 198 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 CEACAM18A8MTB9 384 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 A8MXK9 166 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PPIAL4DF5H284 164 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 TNFRSF13BO14836 293 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-204ENST00000418628 OGG1O15527 345 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 RRP9O43818 475 aaKnown RBP15.61■□□□□ 0.09
PTCD3-204ENST00000418628 CDK1P06493 297 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PPIAL4FP0DN26 164 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 IRF2P14316 349 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 CPT2P23786 658 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 TEX36Q5VZQ5 186 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PLCXD3Q63HM9 321 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 RPL22L1Q6P5R6 122 aaKnown RBP15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PP6455Q8WZ26 134 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 ZNF184Q99676 751 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-204ENST00000418628 TMEM246Q9BRR3 403 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 DUSP21Q9H596 190 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 GPR173Q9NS66 373 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PPIAL4AQ9Y536 164 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 PCDHGB5Q9Y5G0 923 aa15.61■□□□□ 0.09
PTCD3-204ENST00000418628 SIRT4Q9Y6E7 314 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-204ENST00000418628 A6NIN4 97 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 B4DSR2 109 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 ZNF732B4DXR9 585 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 H3BSH0 61 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 LGALS8O00214 317 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 CDIPTO14735 213 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 ZNF205O95201 554 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 RPSAP08865 295 aaKnown RBP15.6■□□□□ 0.09
PTCD3-204ENST00000418628 MPZP25189 248 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 MED21Q13503 144 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 IRF3Q14653 427 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 UBE2V2Q15819 145 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 DMRTC1Q5HYR2 192 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 MOB3CQ70IA8 216 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 UTS2BQ765I0 119 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 LRRC29Q8WV35 223 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 SGCDQ92629 289 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 RPL3LQ92901 407 aaKnown RBP15.6■□□□□ 0.09
PTCD3-204ENST00000418628 SMIM19Q96E16 107 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 TECTBQ96PL2 329 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 PDCD1LG2Q9BQ51 273 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 CDCA4Q9BXL8 241 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 METTL17Q9H7H0 456 aaPredicted RBP15.6■□□□□ 0.09
PTCD3-204ENST00000418628 PLEKHA1Q9HB21 404 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 BABAM2Q9NXR7 383 aa15.6■□□□□ 0.09
PTCD3-204ENST00000418628 POLR3KQ9Y2Y1 108 aaPredicted RBP15.6■□□□□ 0.09
PTCD3-204ENST00000418628 LSM2Q9Y333 95 aaKnown RBP15.6■□□□□ 0.09
PTCD3-204ENST00000418628 KIAA1324LA8MWY0 1029 aaPredicted RBP15.59■□□□□ 0.09
PTCD3-204ENST00000418628 MSMBP08118 114 aa15.59■□□□□ 0.09
PTCD3-204ENST00000418628 CRHBPP24387 322 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms