RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MLXQ9UH92 298 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 OPN4Q9UHM6 478 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 ZNF107Q9UII5 783 aaPredicted RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 SLC35A3Q9Y2D2 325 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 PRG3Q9Y2Y8 225 aaPredicted RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 NOSIPQ9Y314 301 aaKnown RBP2.2□□□□□ -2.06
VPS41-206ENST00000418457 NUP210LQ5VU65 1888 aa2.2□□□□□ -2.06
VPS41-206ENST00000418457 FXYD6-FXYD2A0A087WZ82 144 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 A0A0A6YYD5 115 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 A0A0A6YYH2 397 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TRBV2A0A0J9YWF9 115 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SMIM30A4D0T7 59 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 A6NJ64 397 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CPSF4LA6NMK7 179 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 IFITM5A6NNB3 132 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 A8MUA0 341 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GPR89AB7ZAQ6 455 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 DISC1C4P0D8 188 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 H7C417 338 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 J3QLW9 94 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 K7ERQ8 282 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PHYHO14832 338 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ARPC5O15511 151 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 P2RX6O15547 441 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 BCL2L11O43521 198 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GATCO43716 136 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 LCMT2O60294 686 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 CTNSO60931 367 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RAD51DO75771 328 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RBBP9O75884 186 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ATG12O94817 140 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FGF19O95750 216 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 EPPINO95925 133 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 IGF2P01344 180 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CD8AP01732 235 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 HMGN2P05204 90 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 GP1BAP07359 652 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GUSBP08236 651 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TACSTD2P09758 323 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GKN3PP0CG01 181 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GPR89BP0CG08 455 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 AKAIN1P0CW23 69 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 THEGLP0DJG4 465 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SLC25A4P12235 298 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CYBAP13498 195 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FOLR2P14207 255 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ZNF19P17023 458 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 HLA-GP17693 338 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SRMP19623 302 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CXCL2P19875 107 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PVALBP20472 110 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 CNR1P21554 472 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 DRD5P21918 477 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SLC2A5P22732 501 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ATP5A1P25705 553 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 GPR183P32249 361 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PYCR1P32322 319 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR1D2P34982 312 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CD79BP40259 229 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RFC3P40938 356 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RBM34P42696 430 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 SSR2P43308 183 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 IER3P46695 156 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SLC11A1P49279 550 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MEOX2P50222 304 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GDI2P50395 445 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 P2RX1P51575 399 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 NCBP2P52298 156 aaKnown RBP eCLIP2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR10A3P58181 314 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TAS2R19P59542 299 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 KIAA1024LP59773 190 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ACTBP60709 375 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RAB8AP61006 207 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RAB5BP61020 215 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 EIF5AP63241 154 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 ACTG1P63261 375 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 DCDP81605 110 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 SLC7A9P82251 487 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 DEFA5Q01523 94 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 NAAAQ02083 359 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SLC3A1Q07837 685 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TSTA3Q13630 321 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 GPNMBQ14956 572 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 HMGN3Q15651 99 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CEBPEQ15744 281 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 STK11Q15831 433 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GUCA2BQ16661 112 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ISXQ2M1V0 245 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 HFEQ30201 348 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SLC25A35Q3KQZ1 300 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ARHGAP11BQ3KRB8 267 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CDNFQ49AH0 187 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 LRRC37A5PQ49AS3 106 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PAN3Q58A45 887 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 VWA2Q5GFL6 755 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CLEC12AQ5QGZ9 265 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TMEM69Q5SWH9 247 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 C10orf91Q5T1B1 145 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 AVPI1Q5T686 147 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms