RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 GAL3ST1Q99999 423 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 TINAGL1Q9GZM7 467 aaPredicted RBP11.85□□□□□ -0.51
LIMS1-205ENST00000410093 ASCL3Q9NQ33 180 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 B3GNT2Q9NY97 397 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 EIF3KQ9UBQ5 218 aaKnown RBP11.85□□□□□ -0.51
LIMS1-205ENST00000410093 ZFHX4Q86UP3 3567 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 LAMA5O15230 3695 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 CELSR3Q9NYQ7 3312 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 TUBAL3A6NHL2 446 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 CEACAM18A8MTB9 384 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 PRSS44E7EML9 344 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 F5H5P2 479 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 AKR7A2O43488 359 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 LCATP04180 440 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 MMP7P09237 267 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 FCGR2AP12318 317 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 B4GALT1P15291 398 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 GNB3P16520 340 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 NTF4P34130 210 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ARR3P36575 388 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 MEOX1P50221 254 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 PER3P56645 1201 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 SRSF4Q08170 494 aaKnown RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF774Q6NX45 483 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 MUC20Q8N307 709 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 OR51T1Q8NGJ9 327 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ABHD3Q8WU67 409 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF837Q96EG3 531 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 SLC6A7Q99884 636 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 C1QTNF5Q9BXJ0 243 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 PRRG4Q9BZD6 226 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 METTL9Q9H1A3 318 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 WNT5BQ9H1J7 359 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 IL36GQ9NZH8 169 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 PIPOXQ9P0Z9 390 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 MYEF2Q9P2K5 600 aaKnown RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 ELF5Q9UKW6 265 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-205ENST00000410093 EDARQ9UNE0 448 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 SLC7A11Q9UPY5 501 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 MED12Q93074 2177 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 PKD1L2Q7Z442 2459 aa11.84□□□□□ -0.51
LIMS1-205ENST00000410093 WIPF3A6NGB9 483 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 FOXI3A8MTJ6 420 aaPredicted RBP11.83□□□□□ -0.52
LIMS1-205ENST00000410093 M0QYG6 137 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 TPD52L2O43399 206 aaKnown RBP11.83□□□□□ -0.52
LIMS1-205ENST00000410093 SERPINA5P05154 406 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 MGMTP16455 207 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 FAHP16930 419 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 MAGEA5P43359 124 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 RBP2P50120 134 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 FUT6P51993 359 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 MTCP1P56278 107 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 TSPAN5P62079 268 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 PPIAP62937 165 aaKnown RBP11.83□□□□□ -0.52
LIMS1-205ENST00000410093 OR8B8Q15620 311 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 SNAI3Q3KNW1 292 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 SLC22A6Q4U2R8 563 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 ATPAF1Q5TC12 328 aaPredicted RBP11.83□□□□□ -0.52
LIMS1-205ENST00000410093 TEX261Q6UWH6 196 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 PLXDC2Q6UX71 529 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 LINC00696Q6ZRV3 163 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 MCEMP1Q8IX19 187 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 SKA3Q8IX90 412 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 PXT1Q8NFP0 134 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 OR11H4Q8NGC9 324 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 OR13C8Q8NGS7 320 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 OR4K15Q8NH41 348 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF845Q96IR2 970 aaPredicted RBP11.83□□□□□ -0.52
LIMS1-205ENST00000410093 SOX7Q9BT81 388 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 ZMAT3Q9HA38 289 aaKnown RBP11.83□□□□□ -0.52
LIMS1-205ENST00000410093 GLRX2Q9NS18 164 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 IL17BQ9UHF5 180 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 OPN4Q9UHM6 478 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 HSF4Q9ULV5 492 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 ZNF175Q9Y473 711 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 U3KQ87 197 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
LIMS1-205ENST00000410093 PLSCR5A0PG75 271 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 E9PLN8 166 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 M0R233 179 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 SSX5O60225 188 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 SLC22A5O76082 557 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 IL2RAP01589 272 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 DBHP09172 617 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 NFYAP23511 347 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-205ENST00000410093 AGTR1P30556 359 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 PMELP40967 661 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 ATP1B3P54709 279 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 ARFRP1Q13795 201 aa11.82□□□□□ -0.52
LIMS1-205ENST00000410093 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-205ENST00000410093 LGALSLQ3ZCW2 172 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-205ENST00000410093 SCGB2B2Q4G0G5 96 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms