RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RAB26Q9ULW5 256 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 PCDHGB5Q9Y5G0 923 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 HIVEP2P31629 2446 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 PPIAL4EA0A075B759 164 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 ISPDA4D126 451 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 A6NLC8 198 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 PPIAL4DF5H284 164 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 ZFPL1O95159 310 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 PPIAL4FP0DN26 164 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 CFHR2P36980 270 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 MDH2P40926 338 aaKnown RBP18.75■□□□□ 0.59
PTCD3-203ENST00000409783 GPM6AP51674 278 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 DOC2BQ14184 412 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 PLCXD3Q63HM9 321 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 TMPRSS11AQ6ZMR5 421 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 OR51A4Q8NGJ6 313 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 SGCDQ92629 289 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 HIST1H2AAQ96QV6 131 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 METTL17Q9H7H0 456 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-203ENST00000409783 PPIAL4AQ9Y536 164 aa18.75■□□□□ 0.59
PTCD3-203ENST00000409783 SIRT4Q9Y6E7 314 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-203ENST00000409783 SONP18583 2426 aaKnown RBP18.74■□□□□ 0.59
PTCD3-203ENST00000409783 ZNF732B4DXR9 585 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 CDIPTO14735 213 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 RRP9O43818 475 aaKnown RBP18.74■□□□□ 0.59
PTCD3-203ENST00000409783 IRF2P14316 349 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 EGR1P18146 543 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 GNG3P63215 75 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 ZNF404Q494X3 552 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 CCDC58Q4VC31 144 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 STX19Q8N4C7 294 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 SCCPDHQ8NBX0 429 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 C19orf18Q8NEA5 215 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 RPL3LQ92901 407 aaKnown RBP18.74■□□□□ 0.59
PTCD3-203ENST00000409783 C10orf35Q96D05 121 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 ADAT3Q96EY9 351 aaPredicted RBP18.74■□□□□ 0.59
PTCD3-203ENST00000409783 PDCD1LG2Q9BQ51 273 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 OR51I2Q9H344 312 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 PATZ1Q9HBE1 687 aaKnown RBP18.74■□□□□ 0.59
PTCD3-203ENST00000409783 BABAM2Q9NXR7 383 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 HHLA2Q9UM44 414 aa18.74■□□□□ 0.59
PTCD3-203ENST00000409783 ANKRD61A6NGH8 418 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 OR5B21A6NL26 309 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 TMEM212A6NML5 194 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 F5H0A9 414 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-203ENST00000409783 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-203ENST00000409783 OGG1O15527 345 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 CDK1P06493 297 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 CCDC159P0C7I6 412 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 ZNF12P17014 697 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 SLC35A2P78381 396 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 MED21Q13503 144 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 CDK5R1Q15078 307 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 UBE2V2Q15819 145 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 RPL22L1Q6P5R6 122 aaKnown RBP18.73■□□□□ 0.59
PTCD3-203ENST00000409783 MUC20Q8N307 709 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-203ENST00000409783 SPICQ8N5J4 248 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 ZNF676Q8N7Q3 588 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 LINC01356Q8N9X3 169 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 GATAD2BQ8WXI9 593 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 RGP1Q92546 391 aaPredicted RBP18.73■□□□□ 0.59
PTCD3-203ENST00000409783 RAB39BQ96DA2 213 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 TMEM246Q9BRR3 403 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 CHST5Q9GZS9 411 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 DUSP21Q9H596 190 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 CHCHD3Q9NX63 227 aaKnown RBP18.73■□□□□ 0.59
PTCD3-203ENST00000409783 UBAP1Q9NZ09 502 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 ARHGAP32A7KAX9 2087 aa18.73■□□□□ 0.59
PTCD3-203ENST00000409783 hCG_1807616A0A1W2PRN6 198 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 PQLC2LA1A4F0 135 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 CEACAM18A8MTB9 384 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 TNFRSF13BO14836 293 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-203ENST00000409783 CD80P33681 288 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 RNLSQ5VYX0 342 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 KCTD8Q6ZWB6 473 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 NANOGP1Q8N7R0 232 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 OR10Z1Q8NGY1 313 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 OR5AK2Q8NH90 309 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 LRRC29Q8WV35 223 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 CNBD2Q96M20 576 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 ZNF184Q99676 751 aaPredicted RBP18.72■□□□□ 0.59
PTCD3-203ENST00000409783 PLEKHA1Q9HB21 404 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 YAE1D1Q9NRH1 226 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 ERVK-18Q9QC07 812 aa18.72■□□□□ 0.59
PTCD3-203ENST00000409783 TRBV2A0A0J9YWF9 115 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 SRRM5B3KS81 715 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 B4DSR2 109 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 PTGES3LE9PB15 166 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 LGALS8O00214 317 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 TGFAP01135 160 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 FGGYQ96C11 551 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 CDCA4Q9BXL8 241 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 SCN3BQ9NY72 215 aa18.71■□□□□ 0.59
PTCD3-203ENST00000409783 C3orf80F5H4A9 247 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 RHBDL1O75783 438 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 WNT2P09544 360 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 CRHBPP24387 322 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 SEC61A1P61619 476 aaKnown RBP18.7■□□□□ 0.58
PTCD3-203ENST00000409783 IRF3Q14653 427 aa18.7■□□□□ 0.58
PTCD3-203ENST00000409783 TEX36Q5VZQ5 186 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms