RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
SNX13-202ENST00000409604 FAAP24Q9BTP7 215 aa9.98□□□□□ -0.81
SNX13-202ENST00000409604 SUCNR1Q9BXA5 334 aa9.98□□□□□ -0.81
SNX13-202ENST00000409604 CNTD2Q9H8S5 307 aa9.98□□□□□ -0.81
SNX13-202ENST00000409604 FLVCR2Q9UPI3 526 aa9.98□□□□□ -0.81
SNX13-202ENST00000409604 ZG16O60844 167 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 SIX6O95475 246 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 TK1P04183 234 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 SERPINE2P07093 398 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ZNF17P17021 662 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ZNF92Q03936 586 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 SNAI3Q3KNW1 292 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 CITED4Q96RK1 184 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 LHFPL6Q9Y693 200 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 SMCO3A2RU48 225 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 HMX3A6NHT5 357 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 F5H5P2 479 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 CELA3BP08861 270 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 TAS2R20P59543 309 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 CDONQ4KMG0 1287 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 UBE2NLQ5JXB2 153 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 SSX9Q7RTT3 188 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ZNF441Q8N8Z8 693 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ST8SIA4Q92187 359 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 BARHL1Q9BZE3 327 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 C11orf54Q9H0W9 315 aaPredicted RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 C1orf123Q9NWV4 160 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 LSM5Q9Y4Y9 91 aaKnown RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 IGHV3-43A0A0B4J1X8 118 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 LRRC30A6NM36 301 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 OR4C45A6NMZ5 311 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 HSD17B6O14756 317 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 PRH1P02810 166 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 CD3EP07766 207 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 IGHV3-43DP0DP04 118 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ALDH3B1P43353 468 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 NUBP1P53384 320 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 RPS4XP62701 263 aaKnown RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 IL13RA1P78552 427 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 KLRB1Q12918 225 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 RHOUQ7L0Q8 258 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 SPERTQ8NA61 448 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 PSD2Q9BQI7 771 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 LAMP3Q9UQV4 416 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 DHRS3O75911 302 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 NFYAP23511 347 aaPredicted RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 GSK3AP49840 483 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 KLF3P57682 345 aaPredicted RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 MRPS34P82930 218 aaKnown RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 TAGLNQ01995 201 aaKnown RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 HES1Q14469 280 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 C17orf107Q6ZR85 190 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 MOGAT3Q86VF5 341 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 OR10V1Q8NGI7 309 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ADAMTS17Q8TE56 1095 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 TNFRSF19Q9NS68 423 aa9.97□□□□□ -0.81
SNX13-202ENST00000409604 ERRFI1Q9UJM3 462 aaPredicted RBP9.97□□□□□ -0.81
SNX13-202ENST00000409604 USP9XQ93008 2570 aaPredicted RBP9.96□□□□□ -0.81
SNX13-202ENST00000409604 AIPO00170 330 aa9.96□□□□□ -0.81
SNX13-202ENST00000409604 RLN2P04090 185 aa9.96□□□□□ -0.81
SNX13-202ENST00000409604 BAK1Q16611 211 aa9.96□□□□□ -0.81
SNX13-202ENST00000409604 RNF32Q9H0A6 362 aa9.96□□□□□ -0.81
SNX13-202ENST00000409604 ZNF275Q9NSD4 429 aaPredicted RBP9.96□□□□□ -0.81
SNX13-202ENST00000409604 IGLV1-36A0A0B4J1U3 117 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 AHRRA9YTQ3 701 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 GOSR2O14653 212 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 PLPP2O43688 288 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 SLC22A5O76082 557 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 CD3DP04234 171 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 AKAIN1P0CW23 69 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 RPS23P62266 143 aaKnown RBP9.96□□□□□ -0.82
SNX13-202ENST00000409604 TNFAIP6P98066 277 aaPredicted RBP9.96□□□□□ -0.82
SNX13-202ENST00000409604 RAB12Q6IQ22 244 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 SLC16A12Q6ZSM3 486 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 GVQW1Q8N7I0 195 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 LRRC29Q8WV35 223 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 RAB40AQ8WXH6 277 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 ARHGAP5-AS1Q96IT6 56 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 SEC22CQ9BRL7 303 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 RAB22AQ9UL26 194 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 EXOGQ9Y2C4 368 aaKnown RBP9.96□□□□□ -0.82
SNX13-202ENST00000409604 CCSO14618 274 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
SNX13-202ENST00000409604 STEAP1BQ6NZ63 245 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 ZFP62Q8NB50 900 aaPredicted RBP9.96□□□□□ -0.82
SNX13-202ENST00000409604 OR2T35Q8NGX2 323 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 BCO1Q9HAY6 547 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 CCDC59Q9P031 241 aaKnown RBP9.96□□□□□ -0.82
SNX13-202ENST00000409604 SEMA5BQ9P283 1151 aa9.96□□□□□ -0.82
SNX13-202ENST00000409604 CENPEQ02224 2701 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 CREBL2O60519 120 aaPredicted RBP9.95□□□□□ -0.82
SNX13-202ENST00000409604 TTRP02766 147 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 ZNF81P51508 661 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 MECP2P51608 486 aaKnown RBP9.95□□□□□ -0.82
SNX13-202ENST00000409604 ZNF181Q2M3W8 571 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 KRTCAP3Q53RY4 240 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 BAIAP2L2Q6UXY1 529 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 ZNF573Q86YE8 665 aa9.95□□□□□ -0.82
SNX13-202ENST00000409604 NKAIN3Q8N8D7 197 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms