RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PNLDC1Q8NA58 520 aaKnown RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 OR10R2Q8NGX6 335 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 WBP1Q96G27 269 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 LDAHQ9H6V9 325 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 CRLF2Q9HC73 371 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 MAP1AP78559 2803 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 BCL2L11O43521 198 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 AQP8O94778 261 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 CNR1P21554 472 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 CASRP41180 1078 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 RGS19P49795 217 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 ROM1Q03395 351 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 UNC119Q13432 240 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 TGIF1Q15583 401 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF774Q6NX45 483 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 OR5AS1Q8N127 324 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 SLC22A24Q8N4F4 322 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 SPACA9Q96E40 222 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF442Q9H7R0 627 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF319Q9P2F9 582 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 PRELID3BQ9Y3B1 194 aa11.82□□□□□ -0.52
COL6A2-204ENST00000409416 A6NIZ1 184 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 OR6C65A6NJZ3 312 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 RAB27BO00194 218 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 SCAND1P57086 179 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 RAP1BP61224 184 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 RAP1AP62834 184 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 BLOC1S1P78537 153 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 MPPED2Q15777 294 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 JMJD6Q6NYC1 403 aaPredicted RBP11.81□□□□□ -0.52
COL6A2-204ENST00000409416 ACOT7LQ6ZUV0 252 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 OVCH2Q7RTZ1 564 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 ABHD3Q8WU67 409 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 NXT1Q9UKK6 140 aaKnown RBP11.81□□□□□ -0.52
COL6A2-204ENST00000409416 BET1O15155 118 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 TMEM127O75204 238 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 TTRP02766 147 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 RHBDD2Q6NTF9 364 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF585AQ6P3V2 769 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 HAGHLQ6PII5 290 aaPredicted RBP11.81□□□□□ -0.52
COL6A2-204ENST00000409416 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
COL6A2-204ENST00000409416 GPR137CQ8N3F9 429 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 IL1F10Q8WWZ1 152 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 ASB10Q8WXI3 467 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 DEFB127Q9H1M4 99 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 SLC25A32Q9H2D1 315 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF581Q9P0T4 197 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 TECTAO75443 2155 aa11.81□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF735P0CB33 412 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 AKR1C3P42330 323 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 RSU1Q15404 277 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 C1QL2Q7Z5L3 287 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.8□□□□□ -0.52
COL6A2-204ENST00000409416 MISPQ8IVT2 679 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 OR5H2Q8NGV7 314 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 REEP6Q96HR9 211 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 THOC3Q96J01 351 aaKnown RBP11.8□□□□□ -0.52
COL6A2-204ENST00000409416 NKX6-2Q9C056 277 aaPredicted RBP11.8□□□□□ -0.52
COL6A2-204ENST00000409416 SLC17A5Q9NRA2 495 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 SULT1C2O00338 296 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 FABP1P07148 127 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 MECP2P51608 486 aaKnown RBP11.8□□□□□ -0.52
COL6A2-204ENST00000409416 MCEMP1Q8IX19 187 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 NKAIN3Q8N8D7 197 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 TMEM105Q8N8V8 129 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 ST7LQ8TDW4 575 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 SLCO5A1Q9H2Y9 848 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 RASL12Q9NYN1 266 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 LAMA5O15230 3695 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 GLRA1P23415 457 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 SSR4P51571 173 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 KCNRGQ8N5I3 272 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 OR52H1Q8NGJ2 320 aa11.8□□□□□ -0.52
COL6A2-204ENST00000409416 TLN1Q9Y490 2541 aaKnown RBP11.79□□□□□ -0.52
COL6A2-204ENST00000409416 MPTX1A8MV57 137 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 YKT6O15498 198 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 XRCC2O43543 280 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 EIF3GO75821 320 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL6A2-204ENST00000409416 OR2F2O95006 317 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 RFPL3SP0C7P2 107 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 OR2F1Q13607 317 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF260Q3ZCT1 412 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 FAM166AQ6J272 317 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 FDX2Q6P4F2 183 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 MOB3CQ70IA8 216 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 CBLN2Q8IUK8 224 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 SH3BGRL2Q9UJC5 107 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 ARFGEF3Q5TH69 2177 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 IGKV3D-11A0A0A0MRZ8 115 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 LIPT2A6NK58 231 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 HSPB2A8KAH6 182 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 DIRAS3O95661 229 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 IGFBP3P17936 291 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-204ENST00000409416 PSMB6P28072 239 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 PPIAP62937 165 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms