RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ZNF251Q9BRH9 671 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 ABCG5Q9H222 651 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 PARPBPQ9NWS1 579 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 DMRT1Q9Y5R6 373 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
COL25A1-201ENST00000399126 CHD8Q9HCK8 2581 aa13.2□□□□□ -0.3
COL25A1-201ENST00000399126 TMEM272A0A1B0GTI8 110 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
COL25A1-201ENST00000399126 HTR2CP28335 458 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 AGTR1P30556 359 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 PTH2RP49190 550 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 RNPS1Q15287 305 aaKnown RBP13.19□□□□□ -0.3
COL25A1-201ENST00000399126 FAM76BQ5HYJ3 339 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 GLT8D1Q68CQ7 371 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
COL25A1-201ENST00000399126 OR1M1Q8NGA1 313 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 SNIP1Q8TAD8 396 aaKnown RBP13.19□□□□□ -0.3
COL25A1-201ENST00000399126 HAVCR1Q96D42 359 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 RNF121Q9H920 327 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 COPZ2Q9P299 210 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
COL25A1-201ENST00000399126 OR6C6A6NF89 314 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 KRBOX1C9JBD0 128 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 ZNF587BE7ETH6 402 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 HLA-HP01893 362 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 FCER2P06734 321 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 ZNF20P17024 532 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 CCL1P22362 96 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 INPP1P49441 399 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 OVCH2Q7RTZ1 564 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 ZNF100Q8IYN0 542 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 FAM169BQ8N8A8 192 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 NANPQ8TBE9 248 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 LINC00470Q9BZP3 86 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 CNTD2Q9H8S5 307 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 NOX3Q9HBY0 568 aa13.19□□□□□ -0.3
COL25A1-201ENST00000399126 LYRM1O43325 122 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 IGLV3-1P01715 115 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 TPOP07202 933 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 CFPP27918 469 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 BDKRB2P30411 391 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 RAB25P57735 213 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 SLC36A2Q495M3 483 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 PABPC1L2AQ5JQF8 200 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 ZADH2Q8N4Q0 377 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 S100A16Q96FQ6 103 aaKnown RBP13.18□□□□□ -0.3
COL25A1-201ENST00000399126 TXN2Q99757 166 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 RIMS4Q9H426 269 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-201ENST00000399126 MRPL15Q9P015 296 aaKnown RBP13.18□□□□□ -0.3
COL25A1-201ENST00000399126 UPB1Q9UBR1 384 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 TIMM10BQ9Y5J6 103 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 ETV7Q9Y603 341 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 hCG_1807616A0A1W2PRN6 198 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 TTLL8A6PVC2 850 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 FAHP16930 419 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 MAP2K3P46734 347 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 MMP15P51511 669 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 DOK3Q7L591 496 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 OR5AS1Q8N127 324 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 NPRL2Q8WTW4 380 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 RNF122Q9H9V4 155 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 BIN3Q9NQY0 253 aa13.18□□□□□ -0.3
COL25A1-201ENST00000399126 A0A0B4J293 547 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 LOC100289279A0A1B0GTE1 492 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 CTAG2O75638 210 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 CD37P11049 281 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 CCL2P13500 99 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 EIF2S3P41091 472 aaKnown RBP13.17□□□□□ -0.3
COL25A1-201ENST00000399126 SLC25A24Q6NUK1 477 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 SIAH3Q8IW03 269 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 OR5D14Q8NGL3 314 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 OR52I2Q8NH67 350 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 TRIB1Q96RU8 372 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 PRDM14Q9GZV8 571 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 WASF3Q9UPY6 502 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 IGKV1-9A0A0C4DH69 117 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 LOC390937A0A1W2PQ73 354 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 ARSBP15848 533 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 TAS2R20P59543 309 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 GPR176Q14439 515 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 SWI5Q1ZZU3 235 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
COL25A1-201ENST00000399126 PLEKHA1Q9HB21 404 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 NLKQ9UBE8 527 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
COL25A1-201ENST00000399126 TUBAL3A6NHL2 446 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 FARS2O95363 451 aaKnown RBP13.16□□□□□ -0.3
COL25A1-201ENST00000399126 LCATP04180 440 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 IFNA4P05014 189 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 FAM157BP0CG42 384 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 SMIM6P0DI80 62 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 CAPZA1P52907 286 aa13.16□□□□□ -0.3
COL25A1-201ENST00000399126 SMIM4Q8WVI0 70 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms