RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 M0R135 149 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 RGS11O94810 467 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 AKAIN1P0CW23 69 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 CRYGSP22914 178 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 P2RY6Q15077 328 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 TSC22D1Q15714 1073 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 PCGF3Q3KNV8 242 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 CDH26Q8IXH8 852 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 FTMTQ8N4E7 242 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 CPEB3Q8NE35 698 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 FAM3DQ96BQ1 224 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF799Q96GE5 643 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 ALX4Q9H161 411 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 MOB1AQ9H8S9 216 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 BEX1Q9HBH7 125 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF107Q9UII5 783 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 SPTA1P02549 2419 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ITPR1Q14643 2758 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 PLSCR5A0PG75 271 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 M0R233 179 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 APOC1P02654 83 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 BMP5P22003 454 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 SLC6A9P48067 706 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 POU3F4P49335 361 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ACTBP60709 375 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 TSPAN5P62079 268 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ACTG1P63261 375 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 EXOSC2Q13868 293 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 TMEM211Q6ICI0 200 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF474Q6S9Z5 364 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF704Q6ZNC4 412 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 SLC36A1Q7Z2H8 476 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 NAA40Q86UY6 237 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ELMOD2Q8IZ81 293 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 C1orf162Q8NEQ5 155 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 OR51D1Q8NGF3 324 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 SEC22CQ9BRL7 303 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 SCPEP1Q9HB40 452 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF69Q9UC07 566 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF629Q9UEG4 869 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 DHDHQ9UQ10 334 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 ATRXP46100 2492 aa16.78■□□□□ 0.28
PDLIM2-204ENST00000397760 H3BSH0 61 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 MPC2O95563 127 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 ISG15P05161 165 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 IGFBP3P17936 291 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 PRSS3P35030 304 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 CA7P43166 264 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 UBE2NP61088 152 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 RAB14P61106 215 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 MPPED2Q15777 294 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 C2orf76Q3KRA6 126 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 SFRP5Q5T4F7 317 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 FAM57BQ71RH2 274 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 CCDC36Q8IYA8 594 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 PTX4Q96A99 478 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 BOD1Q96IK1 185 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 DMRTA2Q96SC8 542 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 DPCDQ9BVM2 203 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 PIGMQ9H3S5 423 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 OSGIN2Q9Y236 505 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 MEMO1Q9Y316 297 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 ZGRF1Q86YA3 2104 aa16.77■□□□□ 0.28
PDLIM2-204ENST00000397760 RPS10-NUDT3A0A1W2PQS6 291 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 TTRP02766 147 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 HOXB1P14653 301 aaPredicted RBP16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 M6PRP20645 277 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 PLP2Q04941 152 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 KRTAP27-1Q3LI81 207 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 TMEM244Q5VVB8 128 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 OR4C16Q8NGL9 310 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 ASB5Q8WWX0 329 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 RND1Q92730 232 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 ATPIF1Q9UII2 106 aa16.77■□□□□ 0.27
PDLIM2-204ENST00000397760 HMSDA8MTL9 139 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 P2RY10O00398 339 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 MSTNO14793 375 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 CRYZL1O95825 349 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 ACSM4P0C7M7 580 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 UBCP0CG48 685 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 ANXA7P20073 488 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 ARPC4P59998 168 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 DRAM2Q6UX65 266 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 MDP1Q86V88 176 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 OR8B12Q8NGG6 310 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 OR6M1Q8NGM8 313 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 GPX8Q8TED1 209 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 PGAM5Q96HS1 289 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 ZNF319Q9P2F9 582 aa16.76■□□□□ 0.27
PDLIM2-204ENST00000397760 A0A1W2PR80 420 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 EEF1E1-BLOC1S5C9J1V9 151 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 COX5BP10606 129 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 ACHEP22303 614 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 HOXC12P31275 282 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 OPCMLQ14982 345 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 BHLHA15Q7RTS1 189 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 SLC25A28Q96A46 364 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 GSX2Q9BZM3 304 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 KIF25Q9UIL4 384 aa16.75■□□□□ 0.27
PDLIM2-204ENST00000397760 HHLA2Q9UM44 414 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms