RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 UQCC2Q9BRT2 126 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 STRADBQ9C0K7 418 aa9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 NOSIPQ9Y314 301 aaKnown RBP9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 NCOA6Q14686 2063 aaPredicted RBP9.17□□□□□ -0.94
CPSF1P1-201ENST00000397477 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 GJE1A6NN92 205 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR2A4O95047 310 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 EDN3P14138 238 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 CASRP41180 1078 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 C6orf15Q6UXA7 325 aaPredicted RBP9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 CDH26Q8IXH8 852 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM105Q8N8V8 129 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 AQP3Q92482 292 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR2A7Q96R45 310 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 TCFL5Q9UL49 500 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 RBM7Q9Y580 266 aaKnown RBP9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 IGKV1-9A0A0C4DH69 117 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 BET1O15155 118 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZIC3O60481 467 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 KLF7O75840 302 aaPredicted RBP9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 HLA-HP01893 362 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 CPT2P23786 658 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF660Q6AZW8 331 aaPredicted RBP9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 FAM166AQ6J272 317 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 DHRS13Q6UX07 377 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 UBALD2Q8IYN6 164 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 WNT2BQ93097 391 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 FBXO17Q96EF6 278 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 MOB1AQ9H8S9 216 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 GPR160Q9UJ42 338 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 A0A0A6YYD4 124 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 CDK2AP1O14519 115 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 SSX5O60225 188 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 DHRS3O75911 302 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 PSMB6P28072 239 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 CEBPGP53567 150 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM50BP56557 158 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 ECH1Q13011 328 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 IAH1Q2TAA2 248 aaPredicted RBP9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 FBXL14Q8N1E6 418 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR5L1Q8NGL2 311 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 RNASE11Q8TAA1 199 aaKnown RBP9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 CT55Q8WUE5 264 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 METTL9Q9H1A3 318 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 NPTNQ9Y639 398 aa9.16□□□□□ -0.94
CPSF1P1-201ENST00000397477 A0A1W2PR80 420 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 MED19A0JLT2 244 aaPredicted RBP9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 WIPF3A6NGB9 483 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM127O75204 238 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 IFNA21P01568 189 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 RAB6AP20340 208 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 RAC1P63000 192 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 RIPPLY1Q0D2K3 151 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 PIGYQ3MUY2 71 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 LY6G6FQ5SQ64 297 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF100Q8IYN0 542 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 ZNF581Q9P0T4 197 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 NBASA2RRP1 2371 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 FREM2Q5SZK8 3169 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 TMEM131Q92545 1883 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 A0A0D9SG52 128 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 A0A1W2PNV4 684 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 SCGNO76038 276 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 VAMP5O95183 116 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 FGF5P12034 268 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 CLEC18BQ6UXF7 455 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 OR14K1Q8NGZ2 314 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 UBALD1Q8TB05 177 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 FOXB1Q99853 325 aa9.15□□□□□ -0.94
CPSF1P1-201ENST00000397477 TRAV14DV4A0A0A6YYC5 116 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 LOC105371267A0A1B0GV96 52 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 C3orf80F5H4A9 247 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 SRSF10O75494 262 aaKnown RBP9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 DIRAS3O95661 229 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF735P0CB33 412 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 NME2P22392 152 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 ZNF385CQ66K41 422 aaPredicted RBP9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 SLC25A26Q70HW3 274 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 SLC25A42Q86VD7 318 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR51F2Q8NH61 342 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 SCGB3A2Q96PL1 93 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 HIST1H2AAQ96QV6 131 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 TSNAXQ99598 290 aaKnown RBP9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 DEFB127Q9H1M4 99 aa9.15□□□□□ -0.95
CPSF1P1-201ENST00000397477 MEX3AA1L020 520 aaKnown RBP9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 C5orf49A4QMS7 147 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 EFSO43281 561 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 SYNGR4O95473 234 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 NRASP01111 189 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 HPNP05981 417 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 CELA3AP09093 270 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 MC2RQ01718 297 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 COL19A1Q14993 1142 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 SPATA46Q5T0L3 261 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 ACOT7LQ6ZUV0 252 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 SGPP2Q8IWX5 399 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 STPG2Q8N412 459 aa9.14□□□□□ -0.95
CPSF1P1-201ENST00000397477 OR1F12Q8NHA8 337 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms