RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ZNF35P13682 527 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 SLC25A38Q96DW6 304 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 FAAP24Q9BTP7 215 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF629Q9UEG4 869 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-205ENST00000397017 PROCRQ9UNN8 238 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 OR2AT4A6NND4 320 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 POM121CA8CG34 1229 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 AKR7A2O43488 359 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 WFDC8Q8IUA0 241 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 OR10R2Q8NGX6 335 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 MARCH1Q8TCQ1 289 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 EXTL1Q92935 676 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 PRRT1Q99946 306 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 IFNA21P01568 189 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 NAT2P11245 290 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 ERP29P30040 261 aaKnown RBP13.33□□□□□ -0.28
MCF2L-205ENST00000397017 ROM1Q03395 351 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 SF3B5Q9BWJ5 86 aaKnown RBP13.33□□□□□ -0.28
MCF2L-205ENST00000397017 OR2H1Q9GZK4 316 aa13.33□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF703Q9H7S9 590 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-205ENST00000397017 LRRC3CA6NJW4 275 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 HSPB2A8KAH6 182 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 PRRG2O14669 202 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 SPDEFO95238 335 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 LSM6P62312 80 aaKnown RBP13.32□□□□□ -0.28
MCF2L-205ENST00000397017 MRPS34P82930 218 aaKnown RBP13.32□□□□□ -0.28
MCF2L-205ENST00000397017 CDC20Q12834 499 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 EDDM3AQ14507 147 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 HSPB2Q16082 182 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 SUN5Q8TC36 379 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 FGF11Q92914 225 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 PCDHGA9Q9Y5G4 932 aaKnown RBP13.32□□□□□ -0.28
MCF2L-205ENST00000397017 TGM6O95932 706 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 S100A1P23297 94 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 WDFY1Q8IWB7 410 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 SPERTQ8NA61 448 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 TIMP4Q99727 224 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 ZSCAN5BA6NJL1 495 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 NXPH3O95157 252 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 VSIG8P0DPA2 414 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF17P17021 662 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 GFRALQ6UXV0 394 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 CDH24Q86UP0 819 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 EMG1Q92979 244 aaKnown RBP13.32□□□□□ -0.28
MCF2L-205ENST00000397017 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF319Q9P2F9 582 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 KCNIP3Q9Y2W7 256 aa13.32□□□□□ -0.28
MCF2L-205ENST00000397017 UBE2J1Q9Y385 318 aaPredicted RBP13.32□□□□□ -0.28
MCF2L-205ENST00000397017 C5orf63A6NC05 138 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 SIRPB1O00241 398 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 RNPS1Q15287 305 aaKnown RBP13.31□□□□□ -0.28
MCF2L-205ENST00000397017 HYLS1Q96M11 299 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 SCGB3A2Q96PL1 93 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 SNX18Q96RF0 628 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 C7orf50Q9BRJ6 194 aaKnown RBP13.31□□□□□ -0.28
MCF2L-205ENST00000397017 LRFN3Q9BTN0 628 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 PRR13Q9NZ81 148 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 PLCE1Q9P212 2302 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 A0A0G2JK05 382 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 FIGNL2A6NMB9 653 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 F5H0A9 414 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-205ENST00000397017 F5H5P2 479 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 SC5DO75845 299 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 NGFP01138 241 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 EPHA1P21709 976 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 CASP6P55212 293 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF92Q03936 586 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 OR2B2Q9GZK3 357 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 TREM2Q9NZC2 230 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 GPR160Q9UJ42 338 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 GTF3C1Q12789 2109 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 TRAV39A0A0B4J263 110 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 GFRA3O60609 400 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 CHRM2P08172 466 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 HTR2BP41595 481 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 CLVS2Q5SYC1 327 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 OR10AD1Q8NGE0 317 aa13.31□□□□□ -0.28
MCF2L-205ENST00000397017 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
MCF2L-205ENST00000397017 LSM5Q9Y4Y9 91 aaKnown RBP13.31□□□□□ -0.28
MCF2L-205ENST00000397017 A0A0A6YYH2 397 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 A0A1W2PNV4 684 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 A6NJ64 397 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 MCRIP1C9JLW8 97 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 ZMYND11Q15326 602 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 FAM27BQ5VT28 67 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 SGK3Q96BR1 496 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF488Q96MN9 340 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 PHB2Q99623 299 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 HDHD3Q9BSH5 251 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-205ENST00000397017 RANBP3Q9H6Z4 567 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-205ENST00000397017 FAM206AQ9NX38 181 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-205ENST00000397017 LINC01387J3KSC0 135 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 DIRAS3O95661 229 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 CYC1P08574 325 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 ARR3P36575 388 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms