RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OR14I1A6ND48 311 aa13□□□□□ -0.33
CBX3-202ENST00000396386 PROB1E7EW31 1015 aa13□□□□□ -0.33
CBX3-202ENST00000396386 G3V3Q6 166 aa13□□□□□ -0.33
CBX3-202ENST00000396386 NKX2-8O15522 239 aa13□□□□□ -0.33
CBX3-202ENST00000396386 TNFSF10P50591 281 aa13□□□□□ -0.33
CBX3-202ENST00000396386 MTCP1P56278 107 aa13□□□□□ -0.33
CBX3-202ENST00000396386 TMEM50BP56557 158 aa13□□□□□ -0.33
CBX3-202ENST00000396386 CXADRP78310 365 aa13□□□□□ -0.33
CBX3-202ENST00000396386 FAM3AP98173 230 aa13□□□□□ -0.33
CBX3-202ENST00000396386 TMEM42Q69YG0 159 aa13□□□□□ -0.33
CBX3-202ENST00000396386 LHFPL2Q6ZUX7 228 aa13□□□□□ -0.33
CBX3-202ENST00000396386 TMPRSS7Q7RTY8 843 aa13□□□□□ -0.33
CBX3-202ENST00000396386 CD163Q86VB7 1156 aa13□□□□□ -0.33
CBX3-202ENST00000396386 OR2AK2Q8NG84 335 aa13□□□□□ -0.33
CBX3-202ENST00000396386 OR10K1Q8NGX5 313 aa13□□□□□ -0.33
CBX3-202ENST00000396386 C1QTNF5Q9BXJ0 243 aa13□□□□□ -0.33
CBX3-202ENST00000396386 ZDHHC11Q9H8X9 412 aa13□□□□□ -0.33
CBX3-202ENST00000396386 PIPOXQ9P0Z9 390 aa13□□□□□ -0.33
CBX3-202ENST00000396386 SPRR3Q9UBC9 169 aa13□□□□□ -0.33
CBX3-202ENST00000396386 OTOGLQ3ZCN5 2332 aa13□□□□□ -0.33
CBX3-202ENST00000396386 KNTC1P50748 2209 aa13□□□□□ -0.33
CBX3-202ENST00000396386 A0A096LPE4 126 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 A0A1W2PPZ6 126 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
CBX3-202ENST00000396386 H3BUI4 141 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 RAD51DO75771 328 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 OR2A4O95047 310 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 OR4E1P0C645 316 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 EDN3P14138 238 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 NAT1P18440 290 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 ZNF92Q03936 586 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 SRSF6Q13247 344 aaKnown RBP12.99□□□□□ -0.33
CBX3-202ENST00000396386 ARFRP1Q13795 201 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 ARL6IP1Q15041 203 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 OR8B8Q15620 311 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 ZDHHC22Q8N966 263 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 CPEB3Q8NE35 698 aaKnown RBP12.99□□□□□ -0.33
CBX3-202ENST00000396386 SNAPC3Q92966 411 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 SPSB4Q96A44 273 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 BORCS8Q96FH0 119 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 WDYHV1Q96HA8 205 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 CHST6Q9GZX3 395 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 IRF2BPLQ9H1B7 796 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 B3GNT2Q9NY97 397 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 FAM230AA0A1W2PPH8 454 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 GOSR2O14653 212 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 GFRA3O60609 400 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 NRASP01111 189 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 IFNA6P05013 189 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 TMEM225BP0DP42 221 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 COX5BP10606 129 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 PRSS12P56730 875 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 RNFT1Q5M7Z0 435 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 ZNF767PQ75MW2 155 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 NUFIP2Q7Z417 695 aaKnown RBP12.99□□□□□ -0.33
CBX3-202ENST00000396386 OR4K15Q8NH41 348 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 TECTBQ96PL2 329 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 EIF3KQ9UBQ5 218 aaKnown RBP12.99□□□□□ -0.33
CBX3-202ENST00000396386 KCNN3Q9UGI6 736 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 VSIG4Q9Y279 399 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 CACNA1AO00555 2505 aa12.99□□□□□ -0.33
CBX3-202ENST00000396386 ZNF816-ZNF321PA0A0X1KG74 233 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 SLC22A20A6NK97 555 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 F5H5P2 479 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 TSC22D2O75157 780 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 TOXO94900 526 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 HLA-HP01893 362 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 BLVRBP30043 206 aaPredicted RBP12.98□□□□□ -0.33
CBX3-202ENST00000396386 AGTR1P30556 359 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 RBP2P50120 134 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 CCL11P51671 97 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 FOXG1P55316 489 aaPredicted RBP12.98□□□□□ -0.33
CBX3-202ENST00000396386 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
CBX3-202ENST00000396386 TSPAN5P62079 268 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 GK2Q14410 553 aaPredicted RBP12.98□□□□□ -0.33
CBX3-202ENST00000396386 MPPED2Q15777 294 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 ZBTB37Q5TC79 503 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 RTL6Q6ICC9 239 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 COLCA1Q6ZS62 124 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 ASB13Q8WXK3 278 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 PECRQ9BY49 303 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 ZNF175Q9Y473 711 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 CSAG2Q9Y5P2 127 aa12.98□□□□□ -0.33
CBX3-202ENST00000396386 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 PMP2P02689 132 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 TPOP07202 933 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 ZNF35P13682 527 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 ARR3P36575 388 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 NBL1P41271 181 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 PMP22Q01453 160 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 DHODHQ02127 395 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 RSU1Q15404 277 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 VAX1Q5SQQ9 334 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 PLCXD3Q63HM9 321 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
CBX3-202ENST00000396386 C12orf45Q8N5I9 185 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms