RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 OR2AE1Q8NHA4 323 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 GPX8Q8TED1 209 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SMIM12Q96EX1 92 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SMIM7Q9BQ49 75 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 KCNK6Q9Y257 313 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SPTA1P02549 2419 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 PKD1L2Q7Z442 2459 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 TRIOO75962 3097 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 FTCDNL1E5RQL4 147 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SLC16A8O95907 504 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 STAG3L3P0CL85 134 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 CEBPBP17676 345 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 TEAD1P28347 426 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 CHRNA7P36544 502 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 JOSD1Q15040 202 aaPredicted RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 CHRFAM7AQ494W8 412 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 AGTRAPQ6RW13 159 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 NR2C2APQ86WQ0 139 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 OR5H2Q8NGV7 314 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 CXorf40AQ8TE69 158 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SLC6A18Q96N87 628 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 MACROD1Q9BQ69 325 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 BRF2Q9HAW0 419 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 EHFQ9NZC4 300 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 KLHL13Q9P2N7 655 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 DEC1Q9P2X7 70 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 IGF2RP11717 2491 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SERTM1A2A2V5 107 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 ZNF891A8MT65 544 aaPredicted RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 ITGB1BP1O14713 200 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 MPIG6BO95866 241 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 GCGP01275 180 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 IFNA5P01569 189 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 HLA-HP01893 362 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 GZMBP10144 247 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 TAS2R38P59533 333 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 DND1Q8IYX4 353 aaKnown RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 ZNF385AQ96PM9 386 aaKnown RBP7.55□□□□□ -1.2
NDE1-202ENST00000396355 ZNF426Q9BUY5 554 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 SLC46A2Q9BY10 475 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 MFRPQ9BY79 579 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 RNF150Q9ULK6 438 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 TMED7Q9Y3B3 224 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 IER3IP1Q9Y5U9 82 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 MYO18BQ8IUG5 2567 aa7.55□□□□□ -1.2
NDE1-202ENST00000396355 B4DEV8 164 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 G3V3Q6 166 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 H7BY64 318 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 LEFTY2O00292 366 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TSPAN6O43657 245 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 ALOX12BO75342 701 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 RAD51DO75771 328 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 CXCL1P09341 107 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 BCKDHBP21953 392 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 USF1P22415 310 aaPredicted RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 ELLP55199 621 aaPredicted RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 SLC35A1P78382 337 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 GTF3C1Q12789 2109 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 DUSP5Q16690 384 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 GLYATL3Q5SZD4 288 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 LYG2Q86SG7 212 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 OR6N1Q8NGY5 312 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TMEM255BQ8WV15 326 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 SCGB3A2Q96PL1 93 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TEAD3Q99594 435 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 GTSF1LQ9H1H1 148 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 LYRM2Q9NU23 88 aaPredicted RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 TRAPPC1Q9Y5R8 145 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TAAR5O14804 337 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 SLCO2B1O94956 709 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 DDAH2O95865 285 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 MPC1LP0DKB6 136 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 HNRNPA2B1P22626 353 aaKnown RBP7.54□□□□□ -1.2
NDE1-202ENST00000396355 FPR2P25090 351 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 GNRHRP30968 328 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TMEM33P57088 247 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TCTAP57738 103 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 SLC7A9P82251 487 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 HTD2P86397 168 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 CLN3Q13286 438 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 C2orf27AQ580R0 203 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 KCNIP4Q6PIL6 250 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 OR9A4Q8NGU2 314 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 FAM3DQ96BQ1 224 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 IL17FQ96PD4 163 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TIMM29Q9BSF4 260 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 TMEM204Q9BSN7 226 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 NMNAT2Q9BZQ4 307 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 DHDHQ9UQ10 334 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 RHBDD3Q9Y3P4 386 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 C9JQL5 133 aa7.54□□□□□ -1.2
NDE1-202ENST00000396355 LEFTY1O75610 366 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms