RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 CYC1P08574 325 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 SEC11BP0C7V7 166 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 SPP1P10451 314 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 ZNF43P17038 809 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 EN2P19622 333 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 GUCA1AP43080 201 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 SUCLG1P53597 346 aaKnown RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 NXPH1P58417 271 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 S100A10P60903 97 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 CFHR1Q03591 330 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 IAH1Q2TAA2 248 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 FOXL2NBQ6ZUU3 175 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 FAM57BQ71RH2 274 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 RNF144BQ7Z419 303 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 RTN4RL2Q86UN3 420 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 SULF2Q8IWU5 870 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 OR51F2Q8NH61 342 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 SFT2D1Q8WV19 159 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 HAS2Q92819 552 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 CPNE2Q96FN4 548 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 PGAM5Q96HS1 289 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 S100A13Q99584 98 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 PRRX2Q99811 253 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 SULT4A1Q9BR01 284 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 ZNF768Q9H5H4 540 aaKnown RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 TMEM231Q9H6L2 316 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 GSKIPQ9P0R6 139 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 ZNF319Q9P2F9 582 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
COL17A1-203ENST00000393211 PCDHGA1Q9Y5H4 931 aa8.79□□□□□ -1
COL17A1-203ENST00000393211 PHF3Q92576 2039 aaKnown RBP8.78□□□□□ -1
COL17A1-203ENST00000393211 BORCS7-ASMTA0A0B4J1R7 106 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 C2orf72A6NCS6 295 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 DHRS7CA6NNS2 312 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 E5RGE8 158 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 RER1O15258 196 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 FARS2O95363 451 aaKnown RBP8.78□□□□□ -1
COL17A1-203ENST00000393211 SFTPBP07988 381 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 HOXB5P09067 269 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 QDPRP09417 244 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 GLB1P16278 677 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 PI3P19957 117 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 PTAFRP25105 342 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 FCGR2CP31995 323 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 PTGER4P35408 488 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 PTGDSP41222 190 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 RAB5CP51148 216 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 HIST1H3AP68431 136 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 SLC35A1P78382 337 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 SMAD4Q13485 552 aaKnown RBP8.78□□□□□ -1
COL17A1-203ENST00000393211 C10orf128Q5T292 105 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 HIST2H3PS2Q5TEC6 136 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 GPR157Q5UAW9 335 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 Q6ZS52 159 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 HIST2H3AQ71DI3 136 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 BHLHE23Q8NDY6 225 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 GJC3Q8NFK1 279 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 OR2M3Q8NG83 312 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 OR9K2Q8NGE7 335 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 SLC22A8Q8TCC7 542 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 SHDQ96IW2 340 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 NUDT22Q9BRQ3 303 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 CHST5Q9GZS9 411 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 CACFD1Q9UGQ2 172 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 HSF4Q9ULV5 492 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 KCNIP3Q9Y2W7 256 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 NSG2Q9Y328 171 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 STARD10Q9Y365 291 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 FAM96BQ9Y3D0 163 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 TRANK1O15050 2925 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 RP1P56715 2156 aa8.78□□□□□ -1
COL17A1-203ENST00000393211 TRBV11-1A0A0K0K1C0 115 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 A0A1W2PP11 408 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 SDCBPO00560 298 aaPredicted RBP8.77□□□□□ -1.01
COL17A1-203ENST00000393211 PIAS2O75928 621 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 ZFAND5O76080 213 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 HTR3BO95264 441 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 ONECUT2O95948 504 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 SMIM6P0DI80 62 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 MSR1P21757 451 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 NME2P22392 152 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 DTYMKP23919 212 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 CRIP3Q6Q6R5 217 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 DHRS11Q6UWP2 260 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 Q6ZRG5 221 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF561Q8N587 486 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 LRTM2Q8N967 370 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 SMRP1Q8NCR6 262 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 SEMA6DQ8NFY4 1073 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 RLN3Q8WXF3 142 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 WNT2BQ93097 391 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 GALNT14Q96FL9 552 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 TAAR9Q96RI9 348 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
COL17A1-203ENST00000393211 TCEAL7Q9BRU2 100 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 SOX7Q9BT81 388 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 DUSP15Q9H1R2 295 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms