RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 F5P12259 2224 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 ANKRD34CP0C6C1 535 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 HLA-DOBP13765 273 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 DCAF10Q5QP82 559 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 C17orf107Q6ZR85 190 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 SLC38A6Q8IZM9 456 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 TMEM74BQ9NUR3 256 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 A8MXE2 369 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 ACSM4P0C7M7 580 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 HIST1H1DP16402 221 aaKnown RBP14.71□□□□□ -0.05
SCN3B-202ENST00000392770 GNG3P63215 75 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 NLRC3Q7RTR2 1065 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 C20orf196Q8IYI0 205 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 C1orf87Q8N0U7 546 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 PRAMEF5Q5TYX0 476 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 PRAMEF6Q5VXH4 476 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 LIN7CQ9NUP9 197 aaKnown RBP14.71□□□□□ -0.05
SCN3B-202ENST00000392770 SSSCA1O60232 199 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 TSPAN2O60636 221 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 LRP3O75074 770 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 LGALS4P56470 323 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 SSX9Q7RTT3 188 aa14.71□□□□□ -0.05
SCN3B-202ENST00000392770 OR2F2O95006 317 aa14.71□□□□□ -0.06
SCN3B-202ENST00000392770 LALBAP00709 142 aa14.71□□□□□ -0.06
SCN3B-202ENST00000392770 ZNF17P17021 662 aa14.71□□□□□ -0.06
SCN3B-202ENST00000392770 FUT3P21217 361 aa14.71□□□□□ -0.06
SCN3B-202ENST00000392770 OR2F1Q13607 317 aa14.71□□□□□ -0.06
SCN3B-202ENST00000392770 HES1Q14469 280 aa14.71□□□□□ -0.06
SCN3B-202ENST00000392770 TAS2R30P59541 319 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 ZNF770Q6IQ21 691 aaPredicted RBP14.7□□□□□ -0.06
SCN3B-202ENST00000392770 OR14K1Q8NGZ2 314 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 FAM117AQ9C073 453 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 ACTL6AO96019 429 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 IL11P20809 199 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 PSMB6P28072 239 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 PPT1P50897 306 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SCAND1P57086 179 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 PLPPR5Q32ZL2 321 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 FHL5Q5TD97 284 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 GLDNQ6ZMI3 551 aaPredicted RBP14.7□□□□□ -0.06
SCN3B-202ENST00000392770 OR10X1Q8NGY0 326 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 C1orf196B1AJZ1 125 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 NUPL2O15504 423 aaKnown RBP14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SP9P0CG40 484 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SERTAD4Q9NUC0 356 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 GP1BAP07359 652 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 NGFRP08138 427 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 ADRA2CP18825 462 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 PRSS12P56730 875 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 CDH26Q8IXH8 852 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SVBPQ8N300 66 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 RBMXL3Q8N7X1 1067 aaKnown RBP14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SAV1Q9H4B6 383 aaPredicted RBP14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SLC39A9Q9NUM3 307 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 MRPS18BQ9Y676 258 aaKnown RBP14.7□□□□□ -0.06
SCN3B-202ENST00000392770 DFFBO76075 338 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 HBE1P02100 147 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 TERB2Q8NHR7 220 aa14.7□□□□□ -0.06
SCN3B-202ENST00000392770 SCN3AQ9NY46 2000 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 LIMS1P48059 325 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 LSM6P62312 80 aaKnown RBP14.69□□□□□ -0.06
SCN3B-202ENST00000392770 LOXL4Q96JB6 756 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ZNF71Q9NQZ8 489 aaPredicted RBP14.69□□□□□ -0.06
SCN3B-202ENST00000392770 FGF5P12034 268 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 SDHBP21912 280 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ARL3P36405 182 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 PPP1CBP62140 327 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ABHD3Q8WU67 409 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ZNF354AO60765 605 aaPredicted RBP14.69□□□□□ -0.06
SCN3B-202ENST00000392770 CST2P09228 141 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 TMIGD3P0DMS9 266 aaPredicted RBP14.69□□□□□ -0.06
SCN3B-202ENST00000392770 BMP5P22003 454 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 DHODHQ02127 395 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ACOT7LQ6ZUV0 252 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 TGIF2Q9GZN2 237 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ZNF355PQ9NSJ1 428 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 RNF150Q9ULK6 438 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 ASAH2BP0C7U1 165 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 M6PRP20645 277 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 CISD2Q8N5K1 135 aaKnown RBP14.69□□□□□ -0.06
SCN3B-202ENST00000392770 RTN4IP1Q8WWV3 396 aaPredicted RBP14.69□□□□□ -0.06
SCN3B-202ENST00000392770 RNF32Q9H0A6 362 aa14.69□□□□□ -0.06
SCN3B-202ENST00000392770 NDUFB6O95139 128 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 Q8IYB0 196 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 OR2G3Q8NGZ4 309 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 C2orf50Q96LR7 162 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 FAAP24Q9BTP7 215 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 TMEM182Q6ZP80 229 aaPredicted RBP14.68□□□□□ -0.06
SCN3B-202ENST00000392770 C6orf201Q7Z4U5 140 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 GALMQ96C23 342 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 MRPS18AQ9NVS2 196 aaKnown RBP14.68□□□□□ -0.06
SCN3B-202ENST00000392770 GGTLC2Q14390 218 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 GLRX2Q9NS18 164 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 MTFP1Q9UDX5 166 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 GSK3AP49840 483 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 RBPMSQ93062 196 aaKnown RBP14.68□□□□□ -0.06
SCN3B-202ENST00000392770 TTTY12Q9BZ98 90 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 PURGQ9UJV8 347 aaKnown RBP14.68□□□□□ -0.06
SCN3B-202ENST00000392770 V9GYH0 126 aa14.68□□□□□ -0.06
SCN3B-202ENST00000392770 ZFC3H1O60293 1989 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms