RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 HIF3AQ9Y2N7 669 aa16.77■□□□□ 0.27
CCDC50-202ENST00000392456 ANKRD20A5PA0PJZ0 165 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 SNRPBP14678 240 aaKnown RBP16.76■□□□□ 0.27
CCDC50-202ENST00000392456 LIFP15018 202 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 C1orf140Q5VVS0 124 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 FADS6Q8N9I5 356 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 LRRC75AQ8NAA5 344 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 OR52E2Q8NGJ4 325 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 TMEM234Q8WY98 164 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 ST8SIA1Q92185 356 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 YPEL4Q96NS1 127 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 NRIP3Q9NQ35 241 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 FREM3P0C091 2139 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 TRAV36DV7A0A075B6V5 113 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 A8MVM7 634 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 H3BML4 177 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 MAGEB4O15481 346 aaPredicted RBP16.76■□□□□ 0.27
CCDC50-202ENST00000392456 ARG1P05089 322 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 FAM157CP0CG43 387 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 FABP4P15090 132 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 SUMO3P55854 103 aaPredicted RBP16.76■□□□□ 0.27
CCDC50-202ENST00000392456 RPL18Q07020 188 aaKnown RBP16.76■□□□□ 0.27
CCDC50-202ENST00000392456 PDZD11Q5EBL8 140 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 LY6G6FQ5SQ64 297 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 FAM27D1Q5T7N8 215 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 LINGO2Q7L985 606 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF283Q8N7M2 679 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 TNFAIP8L1Q8WVP5 186 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 JSRP1Q96MG2 331 aaPredicted RBP16.76■□□□□ 0.27
CCDC50-202ENST00000392456 ANGPTL4Q9BY76 406 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 SPENQ96T58 3664 aaKnown RBP16.76■□□□□ 0.27
CCDC50-202ENST00000392456 DMXL2Q8TDJ6 3036 aa16.76■□□□□ 0.27
CCDC50-202ENST00000392456 GABARAPH6UMI1 98 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 NME2P22392 152 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 CASRP41180 1078 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 JOSD1Q15040 202 aaPredicted RBP16.75■□□□□ 0.27
CCDC50-202ENST00000392456 HMGN3Q15651 99 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 SLC16A14Q7RTX9 510 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 TMPRSS7Q7RTY8 843 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 ACBD4Q8NC06 268 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 ZNRF4Q8WWF5 429 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 NTNG2Q96CW9 530 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 Q96M85 177 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF230Q9UIE0 474 aaPredicted RBP16.75■□□□□ 0.27
CCDC50-202ENST00000392456 FLVCR1Q9Y5Y0 555 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 MGAQ8IWI9 3026 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 ETV2O00321 342 aaPredicted RBP16.75■□□□□ 0.27
CCDC50-202ENST00000392456 IGHA1P01876 353 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 CD46P15529 392 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 WT1P19544 449 aaPredicted RBP16.75■□□□□ 0.27
CCDC50-202ENST00000392456 APLNRP35414 380 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 DNASE1L1P49184 302 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF41P51814 821 aaPredicted RBP16.75■□□□□ 0.27
CCDC50-202ENST00000392456 C11orf87Q6NUJ2 197 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 UNQ6126/PRO20091Q6UXV3 157 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 DPY19L2P2Q6ZN68 376 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 GID4Q8IVV7 300 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 KDM8Q8N371 416 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 OR5AP2Q8NGF4 316 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 AKR1E2Q96JD6 320 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 NMNAT3Q96T66 252 aa16.75■□□□□ 0.27
CCDC50-202ENST00000392456 TCF21O43680 179 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 CDC14BO60729 498 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 ALG10Q5BKT4 473 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 SPINK14Q6IE38 97 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF322Q6U7Q0 402 aaPredicted RBP16.74■□□□□ 0.27
CCDC50-202ENST00000392456 DRAM2Q6UX65 266 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 SLC30A7Q8NEW0 376 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 OR4K17Q8NGC6 315 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 OR51L1Q8NGJ5 315 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 BOD1L1Q8NFC6 3051 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 C11orf98E9PRG8 122 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 RPS10P46783 165 aaKnown RBP16.74■□□□□ 0.27
CCDC50-202ENST00000392456 SULT1A1P50225 295 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 CTXN1P60606 82 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 NIPAL3Q6P499 406 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 ZNF610Q8N9Z0 462 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 ADPRHL1Q8NDY3 354 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 KISS1RQ969F8 398 aaPredicted RBP16.74■□□□□ 0.27
CCDC50-202ENST00000392456 PACRGQ96M98 296 aaPredicted RBP16.74■□□□□ 0.27
CCDC50-202ENST00000392456 SULT4A1Q9BR01 284 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 HRH4Q9H3N8 390 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 ABRACLQ9P1F3 81 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 KLK11Q9UBX7 282 aa16.74■□□□□ 0.27
CCDC50-202ENST00000392456 OR5H14A6NHG9 310 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 GRPRP30550 384 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 APOBEC1P41238 236 aaKnown RBP16.73■□□□□ 0.27
CCDC50-202ENST00000392456 PRPS1P60891 318 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 DEPPQ9NTK1 212 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 EXOGQ9Y2C4 368 aaKnown RBP16.73■□□□□ 0.27
CCDC50-202ENST00000392456 TMED3Q9Y3Q3 217 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 A0A1W2PPE2 198 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 RIIAD1A6NNX1 92 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 FTCDNL1E5RQL4 147 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 F8VVB4 439 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 F8VWA3 439 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 H7C417 338 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 NKX2-8O15522 239 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 CD14P08571 375 aa16.73■□□□□ 0.27
CCDC50-202ENST00000392456 GZMBP10144 247 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms