RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CCKARP32238 428 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 ZNF41P51814 821 aaPredicted RBP13.34□□□□□ -0.27
VLDLR-202ENST00000382099 SELENOTP62341 195 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 GGTLC2Q14390 218 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TCTN1Q2MV58 587 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 MPV17LQ2QL34 196 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 C17orf99Q6UX52 265 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 HOGA1Q86XE5 327 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 RCC1LQ96I51 464 aaKnown RBP13.34□□□□□ -0.27
VLDLR-202ENST00000382099 LYSMD1Q96S90 227 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 ZNF2Q9BSG1 426 aaPredicted RBP13.34□□□□□ -0.27
VLDLR-202ENST00000382099 CLEC4EQ9ULY5 219 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 PLXNB3Q9ULL4 1909 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 CNTRLQ7Z7A1 2325 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 A0A1B0GWA3 101 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TBX19O60806 448 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 UMODP07911 640 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 OMGP23515 440 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 SNRPD1P62314 119 aaKnown RBP13.34□□□□□ -0.27
VLDLR-202ENST00000382099 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TMEM225Q6GV28 225 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TMPRSS7Q7RTY8 843 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 DCAF4L2Q8NA75 395 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 SPPL3Q8TCT6 385 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
VLDLR-202ENST00000382099 MYOFQ9NZM1 2061 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 AGR2O95994 175 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 CD55P08174 381 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 OR5G3P0C626 314 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 GLI4P10075 376 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 TCEA2Q15560 299 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 SLC25A26Q70HW3 274 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 OR5AR1Q8NGP9 310 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 ELOVL3Q9HB03 270 aa13.34□□□□□ -0.27
VLDLR-202ENST00000382099 SPAG17Q6Q759 2223 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 APODP05090 189 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 NGFRP08138 427 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 UCP2P55851 309 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 MLC1Q15049 377 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
VLDLR-202ENST00000382099 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 MCHR2Q969V1 340 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 GSX1Q9H4S2 264 aaPredicted RBP13.33□□□□□ -0.28
VLDLR-202ENST00000382099 GNG13Q9P2W3 67 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 INSL5Q9Y5Q6 135 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 CTSAP10619 480 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 P2RY1P47900 373 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 GNB2P62879 340 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 SUPT4H1P63272 117 aaKnown RBP13.33□□□□□ -0.28
VLDLR-202ENST00000382099 ADIRFQ15847 76 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 TMEM176BQ3YBM2 270 aaPredicted RBP13.33□□□□□ -0.28
VLDLR-202ENST00000382099 PLPP4Q5VZY2 271 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 COX15Q7KZN9 410 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 SLC16A9Q7RTY1 509 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 OR2AJ1Q8NGZ0 328 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF689Q96CS4 500 aaPredicted RBP13.33□□□□□ -0.28
VLDLR-202ENST00000382099 PGAM5Q96HS1 289 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 ST6GALNAC5Q9BVH7 336 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 WDR76Q9H967 626 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 SH3BGRL2Q9UJC5 107 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 SERTAD3Q9UJW9 196 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 GPR132Q9UNW8 380 aa13.33□□□□□ -0.28
VLDLR-202ENST00000382099 DEDDO75618 318 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 OPN1MWP04001 364 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 OPN1MW2P0DN77 364 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 OPN1MW3P0DN78 364 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
VLDLR-202ENST00000382099 MFSD12Q6NUT3 480 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF595Q8IYB9 648 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 CXorf40AQ8TE69 158 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 SCDO00767 359 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 CYBAP13498 195 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 ID2Q02363 134 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 ARFRP1Q13795 201 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 ARL14EPQ8N8R7 260 aaPredicted RBP13.32□□□□□ -0.28
VLDLR-202ENST00000382099 OR5H2Q8NGV7 314 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 AQP3Q92482 292 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 C4orf45Q96LM5 186 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 VAMP8Q9BV40 100 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 TRDCB7Z8K6 153 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 CBR3O75828 277 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 CHRM2P08172 466 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 CDKN2AP42771 156 aaKnown RBP13.32□□□□□ -0.28
VLDLR-202ENST00000382099 HIST1H3AP68431 136 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 PRSS8Q16651 343 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 GCNT2Q8N0V5 402 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 SDF2Q99470 211 aa13.32□□□□□ -0.28
VLDLR-202ENST00000382099 SCN2AQ99250 2005 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 A0A1B0GUS0 222 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 TMEM238LA0A1B0GVL6 79 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 AMY2BP19961 511 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms