RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TP53I3Q53FA7 332 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 KRBOX4Q5JUW0 171 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C12orf73Q69YU5 71 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 LAMTOR1Q6IAA8 161 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF843Q8N446 348 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C19orf43Q9BQ61 176 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM59Q9BXS4 323 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 LIN7BQ9HAP6 207 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SIRT3Q9NTG7 399 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 HIF1ANQ9NWT6 349 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 HHLA2Q9UM44 414 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 RCE1Q9Y256 329 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 FAM74A7A6NL05 159 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SNRPBP14678 240 aaKnown RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 DAOP14920 347 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF14P17017 642 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF32P17041 273 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 VAMP1P23763 118 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ETV6P41212 452 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 BSPH1Q075Z2 132 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 FOXO1Q12778 655 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TSPAN31Q12999 210 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 FAM74A3Q4VXF1 159 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF322Q6U7Q0 402 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 DPPA2Q7Z7J5 298 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 STPG2Q8N412 459 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C12orf45Q8N5I9 185 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 OR10K1Q8NGX5 313 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM158Q8WZ71 300 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 CREB3L1Q96BA8 519 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 POM121Q96HA1 1249 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 SIGLEC11Q96RL6 698 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 RASL11BQ9BPW5 248 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 CMSS1Q9BQ75 279 aaKnown RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C20orf24Q9BUV8 137 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TMUB1Q9BVT8 246 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TGIF2Q9GZN2 237 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 C14orf166Q9Y224 244 aaKnown RBP5.78□□□□□ -1.48
NEDD9-202ENST00000379446 AUP1Q9Y679 476 aa5.78□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM72A0PK05 275 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 DNASE2O00115 360 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SH2D1BO14796 132 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 CYC1P08574 325 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 GNG10P50151 68 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 CLDN12P56749 244 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 LGALSLQ3ZCW2 172 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 DMRTC1Q5HYR2 192 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 DOLPP1Q86YN1 238 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SEMA6DQ8NFY4 1073 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 OR11H7Q8NGC8 314 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 OR4C13Q8NGP0 309 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 MRPS24Q96EL2 167 aaKnown RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 BSCL2Q96G97 398 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ISG20L2Q9H9L3 353 aaKnown RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SLC25A19Q9HC21 320 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 GPN1Q9HCN4 374 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 GPR173Q9NS66 373 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 RNF150Q9ULK6 438 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 AK6Q9Y3D8 172 aaKnown RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 HECTD1Q9ULT8 2610 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 F5H0A9 414 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 LANCL1O43813 399 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 AQP8O94778 261 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 EPPINO95925 133 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 IFNA17P01571 189 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 CRHP06850 196 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ZNF728P0DKX0 622 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 PTHLHP12272 177 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 PSMB10P40306 273 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 KCNJ3P48549 501 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SKP2Q13309 424 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 DOC2BQ14184 412 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SHBQ15464 509 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ATRAIDQ6UW56 229 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 Q6ZS92 163 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ZNF511Q8NB15 262 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 R3HDM4Q96D70 268 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ATF6BQ99941 703 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 METTL9Q9H1A3 318 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ATG5Q9H1Y0 275 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 BIN3Q9NQY0 253 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 CRIM1Q9NZV1 1036 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 ZNF629Q9UEG4 869 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 PRELID3BQ9Y3B1 194 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 KRBOX1C9JBD0 128 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 E9PI62 339 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 HRKO00198 91 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 GOSR2O14653 212 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SYNGR3O43761 229 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 LALBAP00709 142 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SERPINE2P07093 398 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 RPA2P15927 270 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 MAKP20794 623 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 FRKP42685 505 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 OR10A3P58181 314 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 HOXA4Q00056 320 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 SPOCK1Q08629 439 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 KCNMB1Q16558 191 aa5.77□□□□□ -1.49
NEDD9-202ENST00000379446 EXOSC6Q5RKV6 272 aaKnown RBP5.77□□□□□ -1.49
NEDD9-202ENST00000379446 TMEM69Q5SWH9 247 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms