RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FAM157BP0CG42 384 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 RANP62826 216 aaKnown RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 DTWD2Q8NBA8 298 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SUMF1Q8NBK3 374 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 OR10J5Q8NHC4 309 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 CABLES2Q9BTV7 478 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 OR5V1Q9UGF6 321 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 LRP12Q9Y561 859 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 SCN10AQ9Y5Y9 1956 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 PEBP1P30086 187 aaKnown RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 CALCRP30988 508 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 HRH1P35367 487 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 INSM1Q01101 510 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 ANKRD16Q6P6B7 361 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 VSTM2LQ96N03 204 aa13.44□□□□□ -0.26
NPHP4-201ENST00000378156 DUSP15Q9H1R2 295 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF638Q14966 1978 aaKnown RBP13.44□□□□□ -0.26
NPHP4-201ENST00000378156 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-201ENST00000378156 RNF151Q2KHN1 245 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 PDZD11Q5EBL8 140 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 DMKNQ6E0U4 476 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-201ENST00000378156 IL34Q6ZMJ4 242 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 DUSP18Q8NEJ0 188 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 NUBPLQ8TB37 319 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 WDR89Q96FK6 387 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF251Q9BRH9 671 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 HIF1ANQ9NWT6 349 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 IGKV1-8A0A0C4DH67 115 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 HRKO00198 91 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 CYR61O00622 381 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 DTYMKP23919 212 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 RAG2P55895 527 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 RBMXL3Q8N7X1 1067 aaKnown RBP13.43□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF485Q8NCK3 441 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 FOXJ3Q9UPW0 622 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 OPRM1P35372 400 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 FMODQ06828 376 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 SLC25A26Q70HW3 274 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 OIT3Q8WWZ8 545 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 C2orf50Q96LR7 162 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 LHX9Q9NQ69 397 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 M0R296 226 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 ENSAO43768 121 aaKnown RBP13.43□□□□□ -0.26
NPHP4-201ENST00000378156 AQP8O94778 261 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 CHRNB4P30926 498 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 OR4S1Q8NGB4 309 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 C4orf45Q96LM5 186 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 TOLLIPQ9H0E2 274 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 FAM234AQ9H0X4 552 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 CES1P1Q9UKY3 287 aa13.43□□□□□ -0.26
NPHP4-201ENST00000378156 PIKFYVEQ9Y2I7 2098 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 GLAP06280 429 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 SPP1P10451 314 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 RPA2P15927 270 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 DMWDQ09019 674 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TRIP6Q15654 476 aaKnown RBP13.42□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF718Q3SXZ3 478 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 CDONQ4KMG0 1287 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 GLDNQ6ZMI3 551 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-201ENST00000378156 FAM185AQ8N0U4 392 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 OR2Y1Q8NGV0 311 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 UCK1Q9HA47 277 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 FAHP16930 419 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 SLC6A1P30531 599 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 FZD5Q13467 585 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 LYG2Q86SG7 212 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 CATSPERDQ86XM0 798 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 KLHDC1Q8N7A1 406 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TSPAN32Q96QS1 320 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TINAGL1Q9GZM7 467 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-201ENST00000378156 PARP12Q9H0J9 701 aaKnown RBP13.42□□□□□ -0.26
NPHP4-201ENST00000378156 SH2D1BO14796 132 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 NDUFB7P17568 137 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 PTAFRP25105 342 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 FOXC1Q12948 553 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 BAMBIQ13145 260 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TMEM91Q6ZNR0 172 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 OR51H1Q8NH63 302 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 PP6455Q8WZ26 134 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TMEM231Q9H6L2 316 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 OCIAD1Q9NX40 245 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 CCL4P13236 92 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TMEM88Q6PEY1 159 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 ZDHHC23Q8IYP9 409 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 TMEM52Q8NDY8 209 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 BOD1Q96IK1 185 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF2Q9BSG1 426 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-201ENST00000378156 FLVCR1Q9Y5Y0 555 aa13.42□□□□□ -0.26
NPHP4-201ENST00000378156 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-201ENST00000378156 ZNF766Q5HY98 468 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 FAM74A1Q5RGS3 127 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 OR51I2Q9H344 312 aa13.41□□□□□ -0.26
NPHP4-201ENST00000378156 MBP02144 154 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms