RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 FGF12P61328 243 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 WDR38Q5JTN6 314 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 CEP78Q5JTW2 689 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 PLCXD3Q63HM9 321 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 PLEKHG7Q6ZR37 379 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 ELMOD2Q8IZ81 293 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 YIPF7Q8N8F6 280 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 OR10H4Q8NGA5 316 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 FAM216AQ8WUB2 273 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 ST8SIA4Q92187 359 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 EME1Q96AY2 570 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 HRASLS5Q96KN8 279 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 FGF23Q9GZV9 251 aaPredicted RBP13.97□□□□□ -0.17
HMGN4-201ENST00000377575 ZNF69Q9UC07 566 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.97□□□□□ -0.17
HMGN4-201ENST00000377575 A0A1W2PQL4 384 aaPredicted RBP13.96□□□□□ -0.17
HMGN4-201ENST00000377575 DHRS7CA6NNS2 312 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.96□□□□□ -0.17
HMGN4-201ENST00000377575 DVL1O14640 695 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 RPP14O95059 124 aaKnown RBP13.96□□□□□ -0.17
HMGN4-201ENST00000377575 IGHV4-38-2P0DP08 117 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 ZNF684Q5T5D7 378 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 C9orf139Q6ZV77 190 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 DOK3Q7L591 496 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 SSX6Q7RTT6 188 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 FAM220AQ7Z4H9 259 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 SIGLECL1Q8N7X8 197 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 OR5A2Q8NGI9 324 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 C9orf16Q9BUW7 83 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 DNTTIP1Q9H147 329 aa13.96□□□□□ -0.17
HMGN4-201ENST00000377575 ZMAT3Q9HA38 289 aaKnown RBP13.96□□□□□ -0.17
HMGN4-201ENST00000377575 METTL15A6NJ78 407 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF879B4DU55 563 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF732B4DXR9 585 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 MAGEB4O15481 346 aaPredicted RBP13.95□□□□□ -0.18
HMGN4-201ENST00000377575 AKR7A2O43488 359 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 SULT1C4O75897 302 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 APOL3O95236 402 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 PLATP00750 562 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 NRASP01111 189 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 MTNR1AP48039 350 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 GMFBP60983 142 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 TUSC1Q2TAM9 212 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 CLVS2Q5SYC1 327 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 GPR157Q5UAW9 335 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 METTL11BQ5VVY1 283 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 MEDAGQ5VYS4 303 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 STUMQ69YW2 141 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 MOB3CQ70IA8 216 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 BTN2A1Q7KYR7 527 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 PPP1R14AQ96A00 147 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 CCL13Q99616 98 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 RASSF4Q9H2L5 321 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 OR51I2Q9H344 312 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 ESM1Q9NQ30 184 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 V9GYS6 101 aa13.95□□□□□ -0.18
HMGN4-201ENST00000377575 IGHV3OR16-10A0A075B7F0 116 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 SNTNA6NMZ2 147 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 P2RY10O00398 339 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 GPR37O15354 613 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 NDUFB3O43676 98 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 TOX4O94842 621 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 GLRA1P23415 457 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 BPIFB3P59826 476 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 UBA52P62987 128 aaKnown RBP13.94□□□□□ -0.18
HMGN4-201ENST00000377575 ACTC1P68032 377 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 ACTA1P68133 377 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 ZIK1Q3SY52 487 aaPredicted RBP13.94□□□□□ -0.18
HMGN4-201ENST00000377575 LRRC10Q5BKY1 277 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 SLC25A30Q5SVS4 291 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 FAM216BQ8N7L0 139 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 ZDHHC22Q8N966 263 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 ZNF671Q8TAW3 534 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 PCGF1Q9BSM1 259 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 WDR13Q9H1Z4 485 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 PLEKHA1Q9HB21 404 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 S100A14Q9HCY8 104 aa13.94□□□□□ -0.18
HMGN4-201ENST00000377575 A0A1B0GVI7 797 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 DLGAP1O14490 977 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 CCL1P22362 96 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 SNRPGP62308 76 aaKnown RBP13.93□□□□□ -0.18
HMGN4-201ENST00000377575 IKZF1Q13422 519 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 ATPAF1Q5TC12 328 aaPredicted RBP13.93□□□□□ -0.18
HMGN4-201ENST00000377575 TMEM42Q69YG0 159 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 C12orf54Q6X4T0 127 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 CATSPERDQ86XM0 798 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
HMGN4-201ENST00000377575 CCDC54Q8NEL0 328 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 OR14K1Q8NGZ2 314 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 SEH1LQ96EE3 360 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 WDFY2Q96P53 400 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 SNTG1Q9NSN8 517 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 NLKQ9UBE8 527 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 RPUSD1Q9UJJ7 312 aaKnown RBP13.93□□□□□ -0.18
HMGN4-201ENST00000377575 GNG8Q9UK08 70 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 SLC22A13Q9Y226 551 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 GMPPBQ9Y5P6 360 aa13.93□□□□□ -0.18
HMGN4-201ENST00000377575 A0A1B0GTI1 187 aa13.92□□□□□ -0.18
HMGN4-201ENST00000377575 A0A1B0GW55 424 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms